RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 BEST4Q8NFU0 473 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 OR11H4Q8NGC9 324 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 OR6M1Q8NGM8 313 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 SUN5Q8TC36 379 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 ST8SIA1Q92185 356 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 CLIP3Q96DZ5 547 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 TSSK2Q96PF2 358 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 GAL3ST4Q96RP7 486 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 HEXA-AS1Q9H8Q6 139 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 GLTPQ9NZD2 209 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 SEMA5BQ9P283 1151 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 MRPS17Q9Y2R5 130 aaKnown RBP11.79□□□□□ -0.52
CPSF7-223ENST00000544669 TMED7-TICAM2A0A0A6YYA0 188 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 IGHV1OR15-9A0A0B4J2B8 117 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 A0A1W2PR77 199 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 TVP23AA6NH52 213 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 L7N2F9 121 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 PSMD9O00233 223 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 AGRPO00253 132 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 DUX1O43812 170 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 SUSD5O60279 629 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 NPIPB7O75200 414 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 ISG15P05161 165 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 CD37P11049 281 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 ZNF823P16415 610 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 CSF2RBP32927 897 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 DAP3P51398 398 aaKnown RBP11.78□□□□□ -0.52
CPSF7-223ENST00000544669 TAS2R19P59542 299 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 PUDPQ08623 228 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 NSDHLQ15738 373 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 MEP1BQ16820 701 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 C1orf140Q5VVS0 124 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 RAB12Q6IQ22 244 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 SERPINA12Q8IW75 414 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 PM20D2Q8IYS1 436 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 PLPP5Q8NEB5 264 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 ZNF519Q8TB69 540 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 EDAQ92838 391 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 FAM3DQ96BQ1 224 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 SLC41A2Q96JW4 573 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 DPCDQ9BVM2 203 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-223ENST00000544669 WWTR1Q9GZV5 400 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 MYOZ1Q9NP98 299 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-223ENST00000544669 MED9Q9NWA0 146 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 KLHDC2Q9Y2U9 406 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 TMED7Q9Y3B3 224 aa11.78□□□□□ -0.52
CPSF7-223ENST00000544669 GOLGA4Q13439 2230 aaKnown RBP11.78□□□□□ -0.52
CPSF7-223ENST00000544669 OIP5O43482 229 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 CTAG2O75638 210 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 PDGFAP04085 211 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 ADRB1P08588 477 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 MST1P26927 711 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 LTBRP36941 435 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 APOBEC1P41238 236 aaKnown RBP11.77□□□□□ -0.52
CPSF7-223ENST00000544669 NR0B1P51843 470 aaKnown RBP11.77□□□□□ -0.52
CPSF7-223ENST00000544669 CLDN12P56749 244 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 ZP1P60852 638 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 OPCMLQ14982 345 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 FAM189A2Q15884 450 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 ACKR1Q16570 336 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 LINC00303Q3SY05 128 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 WDR38Q5JTN6 314 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 CLVS2Q5SYC1 327 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 TMEM244Q5VVB8 128 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 B3GNTL1Q67FW5 361 aaPredicted RBP11.77□□□□□ -0.52
CPSF7-223ENST00000544669 IDO2Q6ZQW0 420 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 NAXDQ8IW45 347 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 D2HGDHQ8N465 521 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 OMA1Q96E52 524 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 SMAD5Q99717 465 aaKnown RBP11.77□□□□□ -0.52
CPSF7-223ENST00000544669 NUDT9Q9BW91 350 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 MED11Q9P086 117 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 PISDQ9UG56 409 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 HHLA2Q9UM44 414 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 SRPK3Q9UPE1 567 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 TMEM184BQ9Y519 407 aaPredicted RBP11.77□□□□□ -0.52
CPSF7-223ENST00000544669 SESN1Q9Y6P5 492 aa11.77□□□□□ -0.52
CPSF7-223ENST00000544669 A0A1B0GX78 115 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 OR6C65A6NJZ3 312 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 PRR32B1ATL7 298 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 DCTN6O00399 190 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 SLC16A7O60669 478 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 AQP8O94778 261 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 PMS2P2O95744 297 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 SRFP11831 508 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 NAGAP17050 411 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 ACHEP22303 614 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 CCKBRP32239 447 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 DCTDP32321 178 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 ADAM8P78325 824 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 FGL1Q08830 312 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 C17orf67Q0P5P2 114 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 BAMBIQ13145 260 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 EXOSC2Q13868 293 aaKnown RBP11.76□□□□□ -0.53
CPSF7-223ENST00000544669 COL19A1Q14993 1142 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 ZMYND11Q15326 602 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 PRSS35Q8N3Z0 413 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 METTL27Q8N6F8 245 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-223ENST00000544669 TMEM229BQ8NBD8 167 aa11.76□□□□□ -0.53
CPSF7-223ENST00000544669 GINS4Q9BRT9 223 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms