RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 B4DSR2 109 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 FBP2O00757 339 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 TFP02787 698 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 IGFBP1P08833 259 aaPredicted RBP11.27□□□□□ -0.61
RTN3-213ENST00000543552 PATE4P0C8F1 98 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 FUT1P19526 365 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 APLNRP35414 380 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.61
RTN3-213ENST00000543552 ALDH3B1P43353 468 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 GZMMP51124 257 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 DVL1P1P54792 670 aaPredicted RBP11.27□□□□□ -0.61
RTN3-213ENST00000543552 TMEM33P57088 247 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 HSF2Q03933 536 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 RPL18Q07020 188 aaKnown RBP11.27□□□□□ -0.61
RTN3-213ENST00000543552 HIST3H3Q16695 136 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 RABL3Q5HYI8 236 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 TMEM154Q6P9G4 183 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 GLCCI1Q86VQ1 547 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.61
RTN3-213ENST00000543552 CALHM3Q86XJ0 350 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 ZNF584Q8IVC4 421 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 RBM15BQ8NDT2 890 aaKnown RBP11.27□□□□□ -0.61
RTN3-213ENST00000543552 ZNF519Q8TB69 540 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 SYNPRQ8TBG9 265 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 ASB10Q8WXI3 467 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 C11orf40Q8WZ69 217 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 LZICQ8WZA0 190 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 MCHR2Q969V1 340 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 C1orf159Q96HA4 380 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 SEPHS2Q99611 448 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 TMEFF2Q9UIK5 374 aaPredicted RBP11.27□□□□□ -0.61
RTN3-213ENST00000543552 RIMS3Q9UJD0 308 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 AP3M1Q9Y2T2 418 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 MED31Q9Y3C7 131 aa11.27□□□□□ -0.61
RTN3-213ENST00000543552 FXYD1O00168 92 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 F13BP05160 661 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 LCKP06239 509 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 SAGP10523 405 aaPredicted RBP11.26□□□□□ -0.61
RTN3-213ENST00000543552 H2AFXP16104 143 aaPredicted RBP11.26□□□□□ -0.61
RTN3-213ENST00000543552 ACADSP16219 412 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 GUCA1AP43080 201 aaPredicted RBP11.26□□□□□ -0.61
RTN3-213ENST00000543552 ARFIP2P53365 341 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 CRYBA2P53672 197 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 UGT2B15P54855 530 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 TEKQ02763 1124 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 CCNIQ14094 377 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 MAD2L1BPQ15013 274 aaPredicted RBP11.26□□□□□ -0.61
RTN3-213ENST00000543552 TAF11Q15544 211 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 LRRC23Q53EV4 343 aaPredicted RBP11.26□□□□□ -0.61
RTN3-213ENST00000543552 ELFN2Q5R3F8 820 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 C10orf128Q5T292 105 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 RFLNBQ8N5W9 214 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 SYT14Q8NB59 555 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 PFN4Q8NHR9 129 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 FNDC8Q8TC99 324 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 TMEM255BQ8WV15 326 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 LIPHQ8WWY8 451 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 ZNF347Q96SE7 839 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 MRPL13Q9BYD1 178 aaKnown RBP11.26□□□□□ -0.61
RTN3-213ENST00000543552 SIAEQ9HAT2 523 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 CCNB1IP1Q9NPC3 277 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 HINT3Q9NQE9 182 aaKnown RBP11.26□□□□□ -0.61
RTN3-213ENST00000543552 TAAR3PQ9P1P4 343 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 FZR1Q9UM11 496 aa11.26□□□□□ -0.61
RTN3-213ENST00000543552 FAM220BPB1ANY3 271 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 SLC22A2O15244 555 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 HPXP02790 462 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 FAM157BP0CG42 384 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 NAT2P11245 290 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 ZNF250P15622 560 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 TCN1P20061 433 aaPredicted RBP11.25□□□□□ -0.61
RTN3-213ENST00000543552 DRD4P21917 467 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 IL2RGP31785 369 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 AQP2P41181 271 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 ZNF133P52736 654 aaPredicted RBP11.25□□□□□ -0.61
RTN3-213ENST00000543552 UCP2P55851 309 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
RTN3-213ENST00000543552 CD47Q08722 323 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 ST3GAL3Q11203 375 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 KLF10Q13118 480 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 PIN1Q13526 163 aaPredicted RBP11.25□□□□□ -0.61
RTN3-213ENST00000543552 TRIP10Q15642 601 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 MSMPQ1L6U9 139 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 KRTAP24-1Q3LI83 254 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 CYBRD1Q53TN4 286 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 FAM205BPQ63HN1 556 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 ARPINQ7Z6K5 226 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 NKAIN4Q8IVV8 208 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 C1orf174Q8IYL3 243 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 TEX29Q8N6K0 151 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 OR2T12Q8NG77 320 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 FGFBP3Q8TAT2 258 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 C10orf82Q8WW14 230 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 SOX7Q9BT81 388 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 C19orf24Q9BVV8 132 aa11.25□□□□□ -0.61
RTN3-213ENST00000543552 NKIRAS2Q9NYR9 191 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms