RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 OR4K13Q8NH42 304 aa10.71□□□□□ -0.69
DDX55-210ENST00000543016 RASD2Q96D21 266 aa10.71□□□□□ -0.69
DDX55-210ENST00000543016 DACH2Q96NX9 599 aa10.71□□□□□ -0.69
DDX55-210ENST00000543016 ACTR6Q9GZN1 396 aa10.71□□□□□ -0.69
DDX55-210ENST00000543016 VCX3BQ9H321 246 aa10.71□□□□□ -0.69
DDX55-210ENST00000543016 NGBQ9NPG2 151 aa10.71□□□□□ -0.69
DDX55-210ENST00000543016 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
DDX55-210ENST00000543016 FKBP7Q9Y680 259 aa10.71□□□□□ -0.69
DDX55-210ENST00000543016 RELNP78509 3460 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 OR5H1A6NKK0 313 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 ZAR1LA6NP61 321 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 MITFO75030 526 aaPredicted RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 LYZL6O75951 148 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 FARS2O95363 451 aaKnown RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 WNT11O96014 354 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 IGFBP1P08833 259 aaPredicted RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 CDKN2AP42771 156 aaKnown RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 MRPS34P82930 218 aaKnown RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 ARF1P84077 181 aaKnown RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 PHYHD1Q5SRE7 291 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 ZNF362Q5T0B9 420 aaPredicted RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 SLC35F1Q5T1Q4 408 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 OGFRL1Q5TC84 451 aaPredicted RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 ANKRD34AQ69YU3 496 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 LEG1Q6P5S2 330 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 KLHL24Q6TFL4 600 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 LINGO2Q7L985 606 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 DMRTC2Q8IXT2 367 aaPredicted RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 NPEPL1Q8NDH3 523 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 OR1K1Q8NGR3 316 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 OR2T4Q8NH00 348 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 FAM222BQ8WU58 562 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 TRUB1Q8WWH5 349 aaKnown RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 NANOS1Q8WY41 292 aaKnown RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 MUCL1Q96DR8 90 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 PLEKHA8Q96JA3 519 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 NMNAT3Q96T66 252 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 DDOQ99489 341 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 SLC29A1Q99808 456 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 FOXB1Q99853 325 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 RACGAP1Q9H0H5 632 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 SYT4Q9H2B2 425 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 FN3KQ9H479 309 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 SIAEQ9HAT2 523 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 TMEM38BQ9NVV0 291 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 SMPD3Q9NY59 655 aaPredicted RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 ZNF226Q9NYT6 803 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 AMDHD2Q9Y303 409 aa10.7□□□□□ -0.7
DDX55-210ENST00000543016 ANKHD1Q8IWZ3 2542 aaKnown RBP10.7□□□□□ -0.7
DDX55-210ENST00000543016 ARPC4-TTLL3A0A0A6YYG9 625 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 H0YJX3 145 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 SURF4O15260 269 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 SLC16A7O60669 478 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 OR8G3PP0DMU2 310 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 KIR2DL3P43628 341 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 UBE2NP61088 152 aaKnown RBP10.69□□□□□ -0.7
DDX55-210ENST00000543016 GLO1Q04760 184 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 LGALS3BPQ08380 585 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 SNAPC1Q16533 368 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 ACSM5Q6NUN0 579 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 FOXL2NBQ6ZUU3 175 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 PTCHD4Q6ZW05 846 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 ZBTB46Q86UZ6 589 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 GLB1L2Q8IW92 636 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 WDFY1Q8IWB7 410 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 FAM169BQ8N8A8 192 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 SLC37A3Q8NCC5 494 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 BCL2L2Q92843 193 aaPredicted RBP10.69□□□□□ -0.7
DDX55-210ENST00000543016 S100PBPQ96BU1 408 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 HRASLS5Q96KN8 279 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 GRIP2Q9C0E4 1043 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 RASSF4Q9H2L5 321 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 KCNN2Q9H2S1 579 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 RIBC2Q9H4K1 309 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 SLC17A5Q9NRA2 495 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 KCNN3Q9UGI6 736 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 FBXL3Q9UKT7 428 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 B9D1Q9UPM9 204 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 MOKQ9UQ07 419 aa10.69□□□□□ -0.7
DDX55-210ENST00000543016 USP9YO00507 2555 aaPredicted RBP10.69□□□□□ -0.7
DDX55-210ENST00000543016 ICE1Q9Y2F5 2266 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 SH3D21A4FU49 640 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 OR6C68A6NDL8 312 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 CASKO14936 926 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 RAD51DO75771 328 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 ATP6V1G2O95670 118 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 CLDN1O95832 211 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 EPXP11678 715 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 CTLA4P16410 223 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 PEX2P28328 305 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 LAP3P28838 519 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 CCKARP32238 428 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 PTDSS1P48651 473 aaKnown RBP10.68□□□□□ -0.7
DDX55-210ENST00000543016 CDC42P60953 191 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 C3orf36Q3SXR2 165 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 TBRG1Q3YBR2 411 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 FAM27BQ5VT28 67 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 C12orf73Q69YU5 71 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 ZNF813Q6ZN06 617 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 SYT9Q86SS6 491 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms