RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ZNF217O75362 1048 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 NKX2-2O95096 273 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 PTHLHP12272 177 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 HOXB9P17482 250 aaPredicted RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 BDKRB2P30411 391 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 SFTPDP35247 375 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 P2RX1P51575 399 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 TPMTP51580 245 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 RPL18Q07020 188 aaKnown RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 IL10RAQ13651 578 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 GNMTQ14749 295 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 C2orf76Q3KRA6 126 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 TMEM240Q5SV17 173 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 PHF19Q5T6S3 580 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF425Q6IV72 752 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 SVBPQ8N300 66 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 KDM8Q8N371 416 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 ARIH2OSQ8N7S6 290 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF565Q8N9K5 539 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 CHAC2Q8WUX2 184 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 CMTM3Q96MX0 182 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 DLL4Q9NR61 685 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 DHCR7Q9UBM7 475 aaKnown RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF346Q9UL40 294 aaKnown RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 TMED7Q9Y3B3 224 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 RALGAPA2Q2PPJ7 1873 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 F5H5K5 113 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 MTRF1O75570 445 aaKnown RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 OPN1LWP04000 364 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 CXCL3P19876 107 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF84P51523 738 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 LUMP51884 338 aaPredicted RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 POLR2HP52434 150 aaKnown RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 DOC2BQ14184 412 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 EMC4Q5J8M3 183 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF362Q5T0B9 420 aaPredicted RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 EEF1A1P5Q5VTE0 462 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 DMKNQ6E0U4 476 aaPredicted RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 SDHCQ99643 169 aaPredicted RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 C1orf198Q9H425 327 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 RNF215Q9Y6U7 377 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 GGT3PA6NGU5 568 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 A8MVM7 634 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 BHLHE40O14503 412 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 PLRG1O43660 514 aaKnown RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 PRICKLE3O43900 615 aaPredicted RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 HTR3BO95264 441 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 CD3DP04234 171 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 LPLP06858 475 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 SDHBP21912 280 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 RAB5BP61020 215 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 MELKQ14680 651 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 AANATQ16613 207 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 TMEM196Q5HYL7 178 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 LINC00346Q8IVM7 164 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 SGPP2Q8IWX5 399 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 MCEMP1Q8IX19 187 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 TP53I13Q8NBR0 393 aaPredicted RBP7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 OR4K15Q8NH41 348 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 OR5B2Q96R09 309 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 AIFM2Q9BRQ8 373 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 RHBDD3Q9Y3P4 386 aa7.49□□□□□ -1.21
PRKAB1-207ENST00000542698 DOCK4Q8N1I0 1966 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 OR2W5A6NFC9 320 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 XRCC3O43542 346 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 RAD51DO75771 328 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 RGS11O94810 467 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 MT-ATP6P00846 226 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 HOXB5P09067 269 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF14P17017 642 aaPredicted RBP7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 CD1CP29017 333 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 RPL27P61353 136 aaKnown RBP7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 EEF1A1P68104 462 aaKnown RBP7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 CLPPQ16740 277 aaPredicted RBP7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 UNQ6126/PRO20091Q6UXV3 157 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 GLDNQ6ZMI3 551 aaPredicted RBP7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 PRSS41Q7RTY9 318 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 MARCH3Q86UD3 253 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 SFTPA1Q8IWL2 248 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF679Q8IYX0 411 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 DND1Q8IYX4 353 aaKnown RBP7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 FAM71CQ8NEG0 241 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 MFSD8Q8NHS3 518 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 SLC22A8Q8TCC7 542 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 ST8SIA4Q92187 359 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 FGGYQ96C11 551 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 NKX2-4Q9H2Z4 354 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 HRH4Q9H3N8 390 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 POFUT1Q9H488 388 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 ACKR4Q9NPB9 350 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 HAO2Q9NYQ3 351 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 ING1Q9UK53 422 aaPredicted RBP7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 HS3ST3A1Q9Y663 406 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 PRAMEF27A3QJZ7 478 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 D6RAR5 112 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 PYCARD-AS1I3L0S3 204 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 DVL2O14641 736 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 LANCL1O43813 399 aa7.48□□□□□ -1.21
PRKAB1-207ENST00000542698 STK17BO94768 372 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms