RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PLBD1Q6P4A8 553 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 SLC25A47Q6Q0C1 308 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 ZNF474Q6S9Z5 364 aaPredicted RBP20.36■□□□□ 0.85
HOMER3-205ENST00000542541 CXXC5Q7LFL8 322 aaKnown RBP20.36■□□□□ 0.85
HOMER3-205ENST00000542541 GABRG1Q8N1C3 465 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 NMNAT2Q9BZQ4 307 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 RERGLQ9H628 205 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 KCNJ16Q9NPI9 418 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 TAS2R16Q9NYV7 291 aa20.36■□□□□ 0.85
HOMER3-205ENST00000542541 H2AFY2Q9P0M6 372 aaPredicted RBP20.36■□□□□ 0.85
HOMER3-205ENST00000542541 HIVEP3Q5T1R4 2406 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 FAM183AA6NL82 134 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 ASCL1P50553 236 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 SH3BGRP55822 239 aaPredicted RBP20.35■□□□□ 0.85
HOMER3-205ENST00000542541 C6orf52Q5T4I8 152 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 ZBTB46Q86UZ6 589 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 OR6V1Q8N148 313 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 FAM26EQ8N5C1 309 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 NSMAFQ92636 917 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 PTP4A1Q93096 173 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 MUS81Q96NY9 551 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 HINT3Q9NQE9 182 aaKnown RBP20.35■□□□□ 0.85
HOMER3-205ENST00000542541 RAB26Q9ULW5 256 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 B9D1Q9UPM9 204 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 HSPE1-MOB4S4R3N1 261 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 CTLA4P16410 223 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 CENPAP49450 140 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 SNRPGP62308 76 aaKnown RBP20.35■□□□□ 0.85
HOMER3-205ENST00000542541 ZNF691Q5VV52 312 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 LINGO2Q7L985 606 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 C8orf59Q8N0T1 100 aaPredicted RBP20.35■□□□□ 0.85
HOMER3-205ENST00000542541 ITLN2Q8WWU7 325 aaPredicted RBP20.35■□□□□ 0.85
HOMER3-205ENST00000542541 TSSK2Q96PF2 358 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 HDHD5Q9BXW7 423 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 RACGAP1Q9H0H5 632 aa20.35■□□□□ 0.85
HOMER3-205ENST00000542541 ZNF99A8MXY4 864 aaPredicted RBP20.34■□□□□ 0.85
HOMER3-205ENST00000542541 M0R129 80 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 AGFG2O95081 481 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 IL5RAQ01344 420 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 GLO1Q04760 184 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 MEDAGQ5VYS4 303 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 PROKR2Q8NFJ6 384 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 OR9Q1Q8NGQ5 310 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 Q9H521 79 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 RASSF1Q9NS23 344 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 MOKQ9UQ07 419 aa20.34■□□□□ 0.85
HOMER3-205ENST00000542541 PCNX1Q96RV3 2341 aa20.33■□□□□ 0.85
HOMER3-205ENST00000542541 FAM90A27PA6NNH2 459 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 PRODHO43272 600 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 CLDN14O95500 239 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 CLIC3O95833 236 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 SPI1P17947 270 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 COX5AP20674 150 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 IGHV1-2P23083 117 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 BLVRAP53004 296 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 FBXL19-AS1Q494R0 122 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 SLC25A30Q5SVS4 291 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 NXNL2Q5VZ03 156 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 USP51Q70EK9 711 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 GLB1L2Q8IW92 636 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 ENTHD1Q8IYW4 607 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 RHOXF1Q8NHV9 184 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 UBE2FQ969M7 185 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 ZNF837Q96EG3 531 aaPredicted RBP20.33■□□□□ 0.84
HOMER3-205ENST00000542541 Q96MT0 163 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 OR51V1Q9H2C8 321 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 MED20Q9H944 212 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 ZNF226Q9NYT6 803 aa20.33■□□□□ 0.84
HOMER3-205ENST00000542541 IGLV1-36A0A0B4J1U3 117 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 IGKV1D-43A0A0B4J1Z2 117 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 CIB4A0PJX0 185 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 DCTN6O00399 190 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 ITGA5P08648 1049 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 CD79BP40259 229 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 SFRP5Q5T4F7 317 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 OR7E24Q6IFN5 339 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 CXorf67Q86X51 503 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-205ENST00000542541 GID4Q8IVV7 300 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 ZNF433Q8N7K0 673 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-205ENST00000542541 KISS1RQ969F8 398 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-205ENST00000542541 FOXB1Q99853 325 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 HCAR1Q9BXC0 346 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 COA3Q9Y2R0 106 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-205ENST00000542541 DIDO1Q9BTC0 2240 aaKnown RBP20.32■□□□□ 0.84
HOMER3-205ENST00000542541 FLNCQ14315 2725 aa20.32■□□□□ 0.84
HOMER3-205ENST00000542541 SNTNA6NMZ2 147 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 GNAO1P09471 354 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 NPR2P20594 1047 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 LAP3P28838 519 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 MRPS34P82930 218 aaKnown RBP20.31■□□□□ 0.84
HOMER3-205ENST00000542541 ARF1P84077 181 aaKnown RBP20.31■□□□□ 0.84
HOMER3-205ENST00000542541 ETFDHQ16134 617 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 OCLNQ16625 522 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 NRN1LQ496H8 165 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 KLHL12Q53G59 568 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 SLC35D3Q5M8T2 416 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 C9orf135Q5VTT2 229 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 AADACL4Q5VUY2 407 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 RFKQ969G6 155 aa20.31■□□□□ 0.84
HOMER3-205ENST00000542541 SEC61A2Q9H9S3 476 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms