RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CHRNA6Q15825 494 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 LPAL2Q16609 132 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 DUSP7Q16829 419 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 MICBQ29980 383 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 QRICH1Q2TAL8 776 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 SBK1Q52WX2 424 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 OLFML2AQ68BL7 652 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 TWF2Q6IBS0 349 aaKnown RBP3.3□□□□□ -1.88
SNHG1-217ENST00000541578 METTL7BQ6UX53 244 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 C2orf66Q6UXQ4 117 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 PLA2G4DQ86XP0 818 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 MARCH9Q86YJ5 346 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 C9orf40Q8IXQ3 194 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 OR2L13Q8N349 312 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 FTMTQ8N4E7 242 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 ACOT4Q8N9L9 421 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 FNDC5Q8NAU1 212 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 CSNK1G2-AS1Q8NCQ2 148 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 C17orf47Q8NEP4 570 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 SUN5Q8TC36 379 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 ACMSDQ8TDX5 336 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 ANKRD49Q8WVL7 239 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 TSEN15Q8WW01 171 aaKnown RBP3.3□□□□□ -1.88
SNHG1-217ENST00000541578 PEX13Q92968 403 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 HAVCR1Q96D42 359 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 PANX1Q96RD7 426 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 ATOH8Q96SQ7 321 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 GAL3ST1Q99999 423 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 CHIAQ9BZP6 476 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 UBXN6Q9BZV1 441 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 VCX3BQ9H321 246 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 NYAP2Q9P242 653 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 SPRR3Q9UBC9 169 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 ASIC3Q9UHC3 531 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 RIMS3Q9UJD0 308 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 NOSIPQ9Y314 301 aaKnown RBP3.3□□□□□ -1.88
SNHG1-217ENST00000541578 TANC1Q9C0D5 1861 aa3.3□□□□□ -1.88
SNHG1-217ENST00000541578 COL4A4P53420 1690 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-217ENST00000541578 PKD1L2Q7Z442 2459 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 SMCO2A6NFE2 343 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 GOLGA6L10A6NI86 522 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 OR5B21A6NL26 309 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 OR2AG2A6NM03 316 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 RSPH10B2B2RC85 870 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 PPP1R2P9O14990 202 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 SOX15O60248 233 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 FGFR1OPO95684 399 aaKnown RBP3.29□□□□□ -1.88
SNHG1-217ENST00000541578 TMEM50AO95807 157 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 LGI1O95970 557 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 IGHG4P01861 327 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 KLK3P07288 261 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-217ENST00000541578 RSPH10BP0C881 870 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 SLC35E2P0CK97 266 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 CD9P21926 228 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 GTF2E2P29084 291 aaKnown RBP3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ADORA1P30542 326 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 S100A5P33763 92 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 UGT1A3P35503 534 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 HLCSP50747 726 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 TLE4Q04727 773 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 DNAJC3Q13217 504 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ASAH1Q13510 395 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 OR5I1Q13606 314 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 DPYSL3Q14195 570 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 GNMTQ14749 295 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 PAGE2BQ5JRK9 111 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 Q6ZN92 141 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF600Q6ZNG1 722 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF440Q8IYI8 595 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 KATNAL2Q8IYT4 538 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 OFCC1Q8IZS5 231 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 OR2L3Q8NG85 312 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 OR7G2Q8NG99 324 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 GPR151Q8TDV0 419 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 PIBF1Q8WXW3 757 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.29□□□□□ -1.886e-13■■□□□ 14.1
SNHG1-217ENST00000541578 ANKRD7Q92527 254 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ELMO1Q92556 727 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF75CPQ92670 426 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-217ENST00000541578 MCHR1Q99705 422 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 BPIFA3Q9BQP9 254 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 PYGO2Q9BRQ0 406 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ZNF670Q9BS34 389 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 API5Q9BZZ5 524 aaKnown RBP3.29□□□□□ -1.88
SNHG1-217ENST00000541578 GEMIN7Q9H840 131 aaKnown RBP3.29□□□□□ -1.88
SNHG1-217ENST00000541578 SLC38A10Q9HBR0 1119 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 MIEF1Q9NQG6 463 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 OR1A1Q9P1Q5 309 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ERVW-1Q9UQF0 538 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 TRAF3IP3Q9Y228 551 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 CSDC2Q9Y534 153 aaKnown RBP3.29□□□□□ -1.88
SNHG1-217ENST00000541578 FLVCR1Q9Y5Y0 555 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 EPG5Q9HCE0 2579 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ACACBO00763 2458 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 ATRXP46100 2492 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 EP300Q09472 2414 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-217ENST00000541578 MYH6P13533 1939 aa3.29□□□□□ -1.88
SNHG1-217ENST00000541578 BAZ2AQ9UIF9 1905 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms