RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 DUX1O43812 170 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 HEPHL1Q6MZM0 1159 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 TTLL10Q6ZVT0 673 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 CSNK1A1LQ8N752 337 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 OR1L3Q8NH93 324 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 HGDQ93099 445 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 NOX3Q9HBY0 568 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 TMEM138Q9NPI0 162 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 GTF2A1LQ9UNN4 478 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 F8W036 122 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 AGR2O95994 175 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 IFNGP01579 166 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 ARL4DP49703 201 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 STPG1Q5TH74 334 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 DGAT2L6Q6ZPD8 337 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 BPIFCQ8NFQ6 507 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 OR52I2Q8NH67 350 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 STK35Q8TDR2 534 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 OR6C1Q96RD1 312 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 TINAGL1Q9GZM7 467 aaPredicted RBP13□□□□□ -0.33
SFSWAP-210ENST00000541286 FLRT3Q9NZU0 649 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 PRSS44E7EML9 344 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 MASP2O00187 686 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 HRKO00198 91 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 NGFRP08138 427 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 DCTDP32321 178 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 BTN2A1Q7KYR7 527 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 OR56B4Q8NH76 319 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 RASD2Q96D21 266 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 SERINC2Q96SA4 455 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF350Q9GZX5 532 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 NOX4Q9NPH5 578 aa13□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF223Q9UK11 482 aaPredicted RBP13□□□□□ -0.33
SFSWAP-210ENST00000541286 A0A1W2PNU3 283 aaPredicted RBP12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 PLSCR5A0PG75 271 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 URADA6NGE7 173 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 MCIDASD6RGH6 385 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 SPINK2P20155 84 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 S100A11P31949 105 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 GRK6P43250 576 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 FCRLAQ7L513 359 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 CDRT4Q8N9R6 151 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF511Q8NB15 262 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 OR10K1Q8NGX5 313 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNRF4Q8WWF5 429 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 PELI1Q96FA3 418 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 FOXN4Q96NZ1 517 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 CRB3Q9BUF7 120 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 DUSP23Q9BVJ7 150 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 SLC39A1Q9NY26 324 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 PCDHGA5Q9Y5G8 931 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 RELNP78509 3460 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 LILRA5A6NI73 299 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 TMEM200CA6NKL6 621 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 D6RAR5 112 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 PLPP2O43688 288 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 RAD1O60671 282 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF35P13682 527 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 SLC6A6P31641 620 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 PON3Q15166 354 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 DCAF12L2Q5VW00 463 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 LCN10Q6JVE6 187 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 ABHD13Q7L211 337 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 DNAAF1Q8NEP3 725 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 ZPLD1Q8TCW7 415 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 DPYSL5Q9BPU6 564 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 NKX6-2Q9C056 277 aaPredicted RBP12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 TSPAN10Q9H1Z9 355 aaPredicted RBP12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 FGF21Q9NSA1 209 aa12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 C19orf53Q9UNZ5 99 aaPredicted RBP12.99□□□□□ -0.33
SFSWAP-210ENST00000541286 H7C1C5 153 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 AIPO00170 330 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 EPXP11678 715 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF28P17035 718 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 CENPAP49450 140 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 LCN6P62502 163 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 SORDQ00796 357 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 ACSM1Q08AH1 577 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 FAM53BQ14153 422 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 GSG1LQ6UXU4 331 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 NDUFAF7Q7L592 441 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 CAMKVQ8NCB2 501 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 TMEM231Q9H6L2 316 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 SRA1Q9HD15 236 aaKnown RBP12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 SLC22A7Q9Y694 548 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 A0A0G2JK05 382 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF10P21506 573 aaPredicted RBP12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 NRG3P56975 720 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 SIRPAP78324 504 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 NHLH1Q02575 133 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 BAMBIQ13145 260 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 SEZ6L2Q6UXD5 910 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 RBMS3Q6XE24 437 aaKnown RBP12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 TMEM185AQ8NFB2 350 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 SLC22A18Q96BI1 424 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 C3orf49Q96BT1 292 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 HRASLSQ9HDD0 168 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 MOKQ9UQ07 419 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms