RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 MUC15Q8N387 334 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 SLC22A24Q8N4F4 322 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 ARIH2OSQ8N7S6 290 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 SYT14Q8NB59 555 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 OR4F15Q8NGB8 312 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 OR52J3Q8NH60 311 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 RSRC1Q96IZ7 334 aaKnown RBP11.38□□□□□ -0.59
LTBR-208ENST00000541005 KCNS3Q9BQ31 491 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 UGT2A1Q9Y4X1 527 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 ATP23Q9Y6H3 246 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 ABCA1O95477 2261 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 IGHV2OR16-5A0A0B4J2B6 119 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 AHCYL1O43865 530 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 KRT36O76013 467 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 NDUFB2O95178 105 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 FARS2O95363 451 aaKnown RBP11.37□□□□□ -0.59
LTBR-208ENST00000541005 FOSL1P15407 271 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 FPR3P25089 353 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 CALCRP30988 508 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 RRM2P31350 389 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 APOBEC3AP31941 199 aaPredicted RBP11.37□□□□□ -0.59
LTBR-208ENST00000541005 CAPZA2P47755 286 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 HMGA2P52926 109 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 ATP5J2P56134 94 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 FXYD6P3P58550 94 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 MRPS34P82930 218 aaKnown RBP11.37□□□□□ -0.59
LTBR-208ENST00000541005 TRAP1Q12931 704 aaKnown RBP11.37□□□□□ -0.59
LTBR-208ENST00000541005 NPRL3Q12980 569 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 ETFDHQ16134 617 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 DNAL1Q4LDG9 190 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 THEM4Q5T1C6 240 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 SLC25A47Q6Q0C1 308 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 FOXL2NBQ6ZUU3 175 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 YTHDF3Q7Z739 585 aaKnown RBP11.37□□□□□ -0.59
LTBR-208ENST00000541005 SKA3Q8IX90 412 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 NABP1Q96AH0 204 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 ZNF442Q9H7R0 627 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 CA10Q9NS85 328 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 ZNF346Q9UL40 294 aaKnown RBP11.37□□□□□ -0.59
LTBR-208ENST00000541005 AURKCQ9UQB9 309 aa11.37□□□□□ -0.59
LTBR-208ENST00000541005 IGKV1D-43A0A0B4J1Z2 117 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 UNC119BA6NIH7 251 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 H7C417 338 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 ACOT8O14734 319 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 SLC2A10O95528 541 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 RAB36O95755 333 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 CD79AP11912 226 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 APEHP13798 732 aaKnown RBP11.36□□□□□ -0.59
LTBR-208ENST00000541005 CD99P14209 185 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 NPR2P20594 1047 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 RPL4P36578 427 aaKnown RBP11.36□□□□□ -0.59
LTBR-208ENST00000541005 ACVR1BP36896 505 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 IFNGR2P38484 337 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 GIPRP48546 466 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 FABP6P51161 128 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 ERVK-25P63136 954 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 MYBPC1Q00872 1141 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 HGFACQ04756 655 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 FMODQ06828 376 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 CD47Q08722 323 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 GPR139Q6DWJ6 353 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 PGM2L1Q6PCE3 622 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 ZER1Q7Z7L7 766 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 GTPBP3Q969Y2 492 aaKnown RBP11.36□□□□□ -0.59
LTBR-208ENST00000541005 CCDC124Q96CT7 223 aaKnown RBP11.36□□□□□ -0.59
LTBR-208ENST00000541005 SLC7A6OSQ96CW6 309 aaPredicted RBP11.36□□□□□ -0.59
LTBR-208ENST00000541005 TRMT61AQ96FX7 289 aaKnown RBP11.36□□□□□ -0.59
LTBR-208ENST00000541005 CLPTM1LQ96KA5 538 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 GPA33Q99795 319 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 THTPAQ9BU02 230 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 SIAEQ9HAT2 523 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 NRIP3Q9NQ35 241 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 GRHPRQ9UBQ7 328 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 ADAM18Q9Y3Q7 739 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 LYVE1Q9Y5Y7 322 aa11.36□□□□□ -0.59
LTBR-208ENST00000541005 NSD1Q96L73 2696 aaPredicted RBP11.35□□□□□ -0.59
LTBR-208ENST00000541005 GYG2O15488 501 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 TXNDC12O95881 172 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 SERPINA5P05154 406 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 MMP7P09237 267 aaPredicted RBP11.35□□□□□ -0.59
LTBR-208ENST00000541005 ZNF35P13682 527 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 HOXB6P17509 224 aaKnown RBP11.35□□□□□ -0.59
LTBR-208ENST00000541005 SDHAP31040 664 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 CDKN1AP38936 164 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 GSSP48637 474 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 PTDSS1P48651 473 aaKnown RBP11.35□□□□□ -0.59
LTBR-208ENST00000541005 RAB1AP62820 205 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 PIGFQ07326 219 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 EFNB3Q15768 340 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 SWI5Q1ZZU3 235 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 SLC36A2Q495M3 483 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 MESTQ5EB52 335 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 C1orf94Q6P1W5 598 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 SMARCD3Q6STE5 483 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 THSD4Q6ZMP0 1018 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 DPY19L2P2Q6ZN68 376 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 ADCK1Q86TW2 530 aa11.35□□□□□ -0.59
LTBR-208ENST00000541005 ZNF584Q8IVC4 421 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms