RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	OR1L3	Q8NH93	324 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GRHL3	Q8TE85	626 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	THEM6	Q8WUY1	208 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CDS1	Q92903	461 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC25A28	Q96A46	364 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MNT	Q99583	582 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ARHGDIG	Q99819	225 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UTP23	Q9BRU9	249 aa	Known RBP	5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TBL1XR1	Q9BZK7	514 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ADGRL4	Q9HBW9	690 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TAS2R10	Q9NYW0	307 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NPFFR2	Q9Y5X5	522 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	B3GALT1	Q9Y5Z6	326 aa		5.15	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UNC80	Q8N2C7	3258 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ARID1A	O14497	2285 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783		A0A1B0GUH1	482 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF98	A6NK75	572 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	STX11	O75558	287 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CCL4	P13236	92 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IFNGR1	P15260	489 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EDNRA	P25101	427 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CERS1	P27544	350 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SOX2	P48431	317 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RAG2	P55895	527 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	BDH1	Q02338	343 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ID2	Q02363	134 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SHB	Q15464	509 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ODF4	Q2M2E3	257 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM44	Q2T9K0	475 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HACD4	Q5VWC8	232 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SEZ6L2	Q6UXD5	910 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DND1	Q8IYX4	353 aa	Known RBP	5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR4K17	Q8NGC6	315 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR2Y1	Q8NGV0	311 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR8K3	Q8NH51	312 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FCAMR	Q8WWV6	532 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HS6ST2	Q96MM7	605 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	G6PC3	Q9BUM1	346 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ANKRD19P	Q9H560	264 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	METTL7A	Q9H8H3	244 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EXOSC3	Q9NQT5	275 aa	Known RBP	5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DLL3	Q9NYJ7	618 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ST6GALNAC2	Q9UJ37	374 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	C5orf42	Q9H799	3197 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SPTBN5	Q9NRC6	3674 aa	Known RBP	5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ATRX	P46100	2492 aa		5.15	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR2M5	A3KFT3	312 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	BHLHE40	O14503	412 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PIN1P1	O15428	100 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EMC8	O43402	210 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	AIFM1	O95831	613 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EML2	O95834	649 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HIST1H2AB	P04908	130 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GIP	P09681	153 aa	Predicted RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RAB3A	P20336	220 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GAL	P22466	123 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RAP2B	P61225	183 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SNRPN	P63162	240 aa	Known RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZFP36L1	Q07352	338 aa	Known RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ATXN7L3	Q14CW9	347 aa	Predicted RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MAPK14	Q16539	360 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DEFB109B	Q30KR1	87 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM69	Q5SWH9	247 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FAM199X	Q6PEV8	388 aa	Predicted RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LRRN1	Q6UXK5	716 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DBX2	Q6ZNG2	339 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HIST3H2A	Q7L7L0	130 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CLRN3	Q8NCR9	226 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SDR9C7	Q8NEX9	313 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR4D10	Q8NGI6	311 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR8S1	Q8NH09	359 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SYNPR	Q8TBG9	265 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	BRIX1	Q8TDN6	353 aa	Known RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SNX33	Q8WV41	574 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HIST1H2AC	Q93077	130 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC25A38	Q96DW6	304 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ELP4	Q96EB1	424 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PELI1	Q96FA3	418 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	C12orf57	Q99622	126 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GFI1	Q99684	422 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CHST6	Q9GZX3	395 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MFF	Q9GZY8	342 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SERINC1	Q9NRX5	453 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MED17	Q9NVC6	651 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FBXO34	Q9NWN3	711 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TAS2R3	Q9NYW6	316 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ABRACL	Q9P1F3	81 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	KLHL9	Q9P2J3	617 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF346	Q9UL40	294 aa	Known RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ERVK-19	Q9WJR5	959 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF175	Q9Y473	711 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SCN3A	Q9NY46	2000 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SC5D	O75845	299 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RPP14	O95059	124 aa	Known RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ERG	P11308	486 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PPP3CB	P16298	524 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LRRC37A5P	Q49AS3	106 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GXYLT1	Q4G148	440 aa		5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF658B	Q4V348	819 aa	Predicted RBP	5.14	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FAM111B	Q6SJ93	734 aa		5.14	□□□□□ -1.59

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