RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 CCDC187A0A096LP49 1063 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 ZC3H12DA2A288 527 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 OR5H15A6NDH6 313 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 OR5H1A6NKK0 313 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 M0R3H8 397 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 FBXO24O75426 580 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 MT-ND5P03915 603 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 FCGR3AP08637 254 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 CD1CP29017 333 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 MAS1LP35410 378 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 RBM34P42696 430 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 RPIAP49247 311 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 SRSF4Q08170 494 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 GAGE1Q13065 139 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 NFATC2Q13469 925 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 HEPN1Q6WQI6 88 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 LANCL3Q6ZV70 420 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 LRRC70Q7Z2Q7 622 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 CLDN19Q8N6F1 224 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF248Q8NDW4 579 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 SLC38A5Q8WUX1 472 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF385AQ96PM9 386 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 ADAM19Q9H013 955 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 POFUT1Q9H488 388 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 HINT3Q9NQE9 182 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 MRPS18CQ9Y3D5 142 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 SCN8AQ9UQD0 1980 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 GNG14A0A1W2PPG7 69 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ACOD1A6NK06 481 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CCSO14618 274 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 PPP1R2P9O14990 202 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 OR4E1P0C645 316 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 FABP4P15090 132 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CDK2P24941 298 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 DPP4P27487 766 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 AOAHP28039 575 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 IL2RGP31785 369 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CTHP32929 405 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CSNK1DP48730 415 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 PCBP4P57723 403 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 PPP2CBP62714 309 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 RPS26P62854 115 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 PPP2CAP67775 309 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 TSPAN31Q12999 210 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CHIT1Q13231 466 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNHIT3Q15649 155 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 HMGN3Q15651 99 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 TMEM35AQ53FP2 167 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ADCK2Q7Z695 626 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 COMTD1Q86VU5 262 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF227Q86WZ6 799 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CPOQ8IVL8 374 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF664Q8N3J9 261 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 LINC00471Q8N535 108 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ZBTB2Q8N680 514 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ACBD4Q8NC06 268 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 OR10H4Q8NGA5 316 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 SYNPRQ8TBG9 265 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CCNL2Q96S94 520 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 S100A13Q99584 98 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 NDC1Q9BTX1 674 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 C1orf198Q9H425 327 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 FKRPQ9H9S5 495 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CNIH4Q9P003 139 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 PRSS21Q9Y6M0 314 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 A0A0B4J2A0 478 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ANKRD66B4E2M5 251 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF587BE7ETH6 402 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 J3QLW9 94 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ETHE1O95571 254 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 PMS2P2O95744 297 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 APODP05090 189 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 PGAM2P15259 253 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF19P17023 458 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 NT5EP21589 574 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 OMPP47874 163 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 CLDN12P56749 244 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 NAAAQ02083 359 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 HNF4GQ14541 408 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 TOMM34Q15785 309 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 FNDC3BQ53EP0 1204 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 STPG1Q5TH74 334 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 LPCAT3Q6P1A2 487 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 TTLL10Q6ZVT0 673 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 OR6T1Q8NGN1 323 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 MAFAQ8NHW3 353 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 SAT2Q96F10 170 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 TMEM19Q96HH6 336 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 SMIM8Q96KF7 97 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 RIOK2Q9BVS4 552 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 OR52A5Q9H2C5 316 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 OR51B6Q9H340 312 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 RGCCQ9H4X1 137 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ZDHHC6Q9H6R6 413 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 LMAN1LQ9HAT1 526 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 ANKRD10Q9NXR5 420 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 SHPKQ9UHJ6 478 aa8.62□□□□□ -1.03
CTNNA1-243ENST00000540387 SLC22A14Q9Y267 594 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms