RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 LRFN4Q6PJG9 635 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 C17orf107Q6ZR85 190 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 C9orf139Q6ZV77 190 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 SPATC1Q76KD6 591 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 NUDCD3Q8IVD9 361 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 ANKRD42Q8N9B4 389 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 OR1J1Q8NGS3 322 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC47A1Q96FL8 570 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 CCT8L2Q96SF2 557 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 EPYCQ99645 322 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 EGLN1Q9GZT9 426 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 BEX1Q9HBH7 125 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 BCL2L10Q9HD36 194 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC6A13Q9NSD5 602 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM38BQ9NVV0 291 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 MRPL39Q9NYK5 338 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 GLTPQ9NZD2 209 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 EGFL7Q9UHF1 273 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 RAP2CQ9Y3L5 183 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 NPTNQ9Y639 398 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 IQCMA0A1B0GVH7 501 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 PLSCR5A0PG75 271 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 M0QZ24 198 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 DHHO43323 396 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 ADH4P08319 380 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 ZCCHC18P0CG32 403 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 HTR2AP28223 471 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 BIDP55957 195 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 ABCE1P61221 599 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 CBX1P83916 185 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 PLP2Q04941 152 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 PAX8Q06710 450 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 MPP2Q14168 576 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 ZNF718Q3SXZ3 478 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC36A2Q495M3 483 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 FAM91A1Q658Y4 838 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 OGFOD2Q6N063 350 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC16A14Q7RTX9 510 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 KIR3DL3Q8N743 410 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 OR52E2Q8NGJ4 325 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 OR6X1Q8NH79 312 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 WFDC12Q8WWY7 111 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 MOGAT1Q96PD6 335 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 CITED1Q99966 193 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 NUF2Q9BZD4 464 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 C20orf27Q9GZN8 174 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 TPT1P8Q9HAU6 139 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 PATZ1Q9HBE1 687 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 NPHS2Q9NP85 383 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 CYSLTR2Q9NS75 346 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 INTS9Q9NV88 658 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 AIG1Q9NVV5 245 aa9.81□□□□□ -0.84
CLSTN3-209ENST00000539982 TIMM23O14925 209 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 SERPINI2O75830 405 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 ANP32DO95626 131 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 GPANK1O95872 356 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 IGHV2-70P01814 119 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 SERPINE1P05121 402 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 IL6P05231 212 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 ALDOCP09972 364 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 PPIAL4GP0DN37 164 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 PRKAR1BP31321 381 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 LIPAP38571 399 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 MDH1P40925 334 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 ETV4P43268 484 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 NRN1LQ496H8 165 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 FBLN7Q53RD9 439 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 THEM4Q5T1C6 240 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 RHOUQ7L0Q8 258 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 KLHL36Q8N4N3 616 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 SPICQ8N5J4 248 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 C10orf53Q8N6V4 93 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 RBM15BQ8NDT2 890 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 OR4K5Q8NGD3 323 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 OR4F5Q8NH21 305 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 ZNF566Q969W8 418 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 MARS2Q96GW9 593 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 DCLRE1CQ96SD1 692 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 DIRC2Q96SL1 478 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 ZBTB18Q99592 522 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 RSPO3Q9BXY4 272 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 MEAF6Q9HAF1 191 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 SELENONQ9NZV5 590 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 KLHL21Q9UJP4 597 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 ZDHHC8Q9ULC8 765 aa9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 SOX21Q9Y651 276 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-209ENST00000539982 NBEAL2Q6ZNJ1 2754 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 FAM181BA6NEQ2 426 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 ZSCAN5BA6NJL1 495 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 A8MXK9 166 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 LRRN3E7EW58 273 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 C11orf98E9PRG8 122 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 HOXA3O43365 443 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 OR6A2O95222 327 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 PLATP00750 562 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 MT-ATP6P00846 226 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 CRYBA1P05813 215 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 CD55P08174 381 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 QDPRP09417 244 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 ADORA3P0DMS8 318 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms