RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 EIF2S3LQ2VIR3 472 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF324BQ6AW86 544 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 B3GLCTQ6Y288 498 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 C3P1Q6ZMU1 363 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SHFQ7M4L6 423 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GLB1L2Q8IW92 636 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GCNT2Q8N0V5 402 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 OR6V1Q8N148 313 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 POMGNT2Q8NAT1 580 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 OR6N2Q8NGY6 317 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FBLIM1Q8WUP2 373 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MCHR2Q969V1 340 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TMEM45BQ96B21 275 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FOXN4Q96NZ1 517 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 INTS14Q96SY0 518 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TBX5Q99593 518 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 HCAR1Q9BXC0 346 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLCO5A1Q9H2Y9 848 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 RNF122Q9H9V4 155 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GP6Q9HCN6 339 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CNOT2Q9NZN8 540 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PSORS1C1Q9UIG5 152 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PROCRQ9UNN8 238 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 COMMD3-BMI1R4GMX3 469 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MGAQ8IWI9 3026 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DNAJC13O75165 2243 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 LAMA5O15230 3695 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ITPR1Q14643 2758 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 IGKV3D-15A0A087WSY6 115 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CD8B2A6NJW9 211 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 E9PQ18 207 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DHHO43323 396 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FZD7O75084 574 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FARS2O95363 451 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CLPTM1O96005 669 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 IGHV3-9P01782 118 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SPARCP09486 303 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PGA4P0DJD7 388 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PGA3P0DJD8 388 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DCKP27707 260 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 LAP3P28838 519 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CDH15P55291 814 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ACTC1P68032 377 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ACTA1P68133 377 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ADAM8P78325 824 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 EFNB1P98172 346 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FMODQ06828 376 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PIGFQ07326 219 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TAF13Q15543 124 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF362Q5T0B9 420 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TMPRSS11AQ6ZMR5 421 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLC35F2Q8IXU6 374 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 C20orf196Q8IYI0 205 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF511Q8NB15 262 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 THEM6Q8WUY1 208 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SNX33Q8WV41 574 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLX1AQ9BQ83 275 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MRPS26Q9BYN8 205 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF696Q9H7X3 374 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 BCO1Q9HAY6 547 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CRLF2Q9HC73 371 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CLCF1Q9UBD9 225 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 LAMP5Q9UJQ1 280 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 OSGIN2Q9Y236 505 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 EXOSC1Q9Y3B2 195 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TMEM14AQ9Y6G1 99 aa9.45□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CIB4A0PJX0 185 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF593O00488 134 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MRPS14O60783 128 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CDK1P06493 297 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PIPP12273 146 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CTLA4P16410 223 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 AGTR1P30556 359 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CAPZA2P47755 286 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ENTPD1P49961 510 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TDGF1P3P51864 188 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ROR2Q01974 943 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TGFBR3Q03167 851 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 HSF2Q03933 536 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PMPCAQ10713 525 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FAPQ12884 760 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ETFDHQ16134 617 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 C9orf135Q5VTT2 229 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF773Q6PK81 442 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FAM214BQ7L5A3 538 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLC16A9Q7RTY1 509 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 NUFIP2Q7Z417 695 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 LHFPL3Q86UP9 236 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DOLPP1Q86YN1 238 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 KLHL36Q8N4N3 616 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ACBD7Q8N6N7 88 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZIC4Q8N9L1 334 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 C9orf106Q8NAJ2 232 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ST6GALNAC3Q8NDV1 305 aa9.44□□□□□ -0.9
TNFRSF1A-211ENST00000538363 OR4F15Q8NGB8 312 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms