RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PCP4L1A6NKN8 68 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 CBR3O75828 277 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 BCHEP06276 602 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 C2P06681 752 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 YAP1P46937 504 aaKnown RBP1.96□□□□□ -2.1
CCDC7-208ENST00000537047 POU2AF1Q16633 256 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 EXOC3L2Q2M3D2 409 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 PDZK1Q5T2W1 519 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 LRRC74BQ6ZQY2 392 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 PUSL1Q8N0Z8 303 aaKnown RBP1.96□□□□□ -2.1
CCDC7-208ENST00000537047 STPG2Q8N412 459 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 ABHD3Q8WU67 409 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 IFT74Q96LB3 600 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 P2RX4Q99571 388 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 FOXC2Q99958 501 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 RARRES2Q99969 163 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 SULT4A1Q9BR01 284 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 SLC25A2Q9BXI2 301 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 MRPL37Q9BZE1 423 aaKnown RBP1.96□□□□□ -2.1
CCDC7-208ENST00000537047 PPA2Q9H2U2 334 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 CDH9Q9ULB4 789 aa1.96□□□□□ -2.1
CCDC7-208ENST00000537047 IGLV1-50A0A075B6I6 118 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 TRAV39A0A0B4J263 110 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 HIDE1A8MVS5 230 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 MAGEB3O15480 346 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 SOX15O60248 233 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 FCMRO60667 390 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 OR7A10O76100 309 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 RAB3DO95716 219 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 IQCF3P0C7M6 154 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 SERPINB5P36952 375 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 CCT3P49368 545 aaKnown RBP1.95□□□□□ -2.1
CCDC7-208ENST00000537047 RORCP51449 518 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 BPIFB3P59826 476 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 OGDHQ02218 1023 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 ZNF92Q03936 586 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 PON3Q15166 354 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 IRF4Q15306 451 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 HDDC2Q7Z4H3 204 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 WDR86Q86TI4 376 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 TMEM135Q86UB9 458 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 CALHM1Q8IU99 346 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 FAM83FQ8NEG4 500 aaPredicted RBP1.95□□□□□ -2.1
CCDC7-208ENST00000537047 OR2T34Q8NGX1 318 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 LKAAEAR1Q8TD35 194 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 ZCCHC13Q8WW36 166 aaKnown RBP1.95□□□□□ -2.1
CCDC7-208ENST00000537047 CREB3L1Q96BA8 519 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 FAM3DQ96BQ1 224 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 C10orf35Q96D05 121 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 TMEM59Q9BXS4 323 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 RPF2Q9H7B2 306 aaKnown RBP1.95□□□□□ -2.1
CCDC7-208ENST00000537047 SYNDIG1Q9H7V2 258 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 LIN28AQ9H9Z2 209 aaKnown RBP1.95□□□□□ -2.1
CCDC7-208ENST00000537047 C12orf10Q9HB07 376 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 NMRAL1Q9HBL8 299 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 FAM49BQ9NUQ9 324 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 TUBGCP6Q96RT7 1819 aa1.95□□□□□ -2.1
CCDC7-208ENST00000537047 CCL21O00585 134 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 IGHV2-5P01817 119 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 C1GALT1C1LP0DN25 315 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 CD1CP29017 333 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 CDKN2BP42772 138 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 CDH4P55283 916 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 LOXL1Q08397 574 aaPredicted RBP1.94□□□□□ -2.1
CCDC7-208ENST00000537047 CCDC92Q53HC0 331 aaPredicted RBP1.94□□□□□ -2.1
CCDC7-208ENST00000537047 CFAP157Q5JU67 520 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 ATAD3BQ5T9A4 648 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 TRPV1Q8NER1 839 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 RNF139Q8WU17 664 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 ESR2Q92731 530 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 SYAP1Q96A49 352 aaPredicted RBP1.94□□□□□ -2.1
CCDC7-208ENST00000537047 NARS2Q96I59 477 aaKnown RBP1.94□□□□□ -2.1
CCDC7-208ENST00000537047 NIPAL2Q9H841 368 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 UVRAGQ9P2Y5 699 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 EPS15L1Q9UBC2 864 aa1.94□□□□□ -2.1
CCDC7-208ENST00000537047 PTBP2Q9UKA9 531 aaKnown RBP1.94□□□□□ -2.1
CCDC7-208ENST00000537047 WDR62O43379 1518 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 ZNF726A6NNF4 738 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 ZNF850A8MQ14 1090 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 GMFGO60234 142 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 EIF3GO75821 320 aaKnown RBP eCLIP1.93□□□□□ -2.1
CCDC7-208ENST00000537047 CEACAM6P40199 344 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 MAGEA8P43361 318 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 MAB21L1Q13394 359 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 CLINT1Q14677 625 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 SMUG1Q53HV7 270 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 THEM4Q5T1C6 240 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 PRMT9Q6P2P2 845 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 LHFPL3Q86UP9 236 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 GATSQ8NAP1 163 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 COQ8AQ8NI60 647 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 TMEM54Q969K7 222 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 COQ2Q96H96 371 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 PANX2Q96RD6 677 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 CAMK2N2Q96S95 79 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 SH3GL1Q99961 368 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 ZSCAN5AQ9BUG6 496 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 FAIM2Q9BWQ8 316 aa1.93□□□□□ -2.1
CCDC7-208ENST00000537047 DDX19AQ9NUU7 478 aaKnown RBP1.93□□□□□ -2.1
CCDC7-208ENST00000537047 ADAM28Q9UKQ2 775 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms