RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PUSL1Q8N0Z8 303 aaKnown RBP4.96□□□□□ -1.61
PTPRD-213ENST00000537002 OR51T1Q8NGJ9 327 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 RAB39BQ96DA2 213 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 MEGF10Q96KG7 1140 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF587Q96SQ5 575 aaPredicted RBP4.96□□□□□ -1.61
PTPRD-213ENST00000537002 SMG9Q9H0W8 520 aaKnown RBP4.96□□□□□ -1.61
PTPRD-213ENST00000537002 LINC00597Q9H2U6 94 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 CXorf36Q9H7Y0 433 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 MTHFD2LQ9H903 347 aaPredicted RBP4.96□□□□□ -1.61
PTPRD-213ENST00000537002 PCDHB10Q9UN67 800 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 FBXO7Q9Y3I1 522 aa4.96□□□□□ -1.61
PTPRD-213ENST00000537002 FAM74A7A6NL05 159 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SCDO00767 359 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 HYAL3O43820 417 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SOCS5O75159 536 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 LEFTY1O75610 366 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 PEX11BO96011 259 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ITGB2P05107 769 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 DCTDP32321 178 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 AGFG1P52594 562 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 HAGHQ16775 308 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 LINC00303Q3SY05 128 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 FAM74A3Q4VXF1 159 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 PRRT3Q5FWE3 981 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SLC22A25Q6T423 547 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 DLK2Q6UY11 383 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SGPP2Q8IWX5 399 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZCCHC4Q9H5U6 513 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 A0A0U1RQF3 1178 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 DVL2O14641 736 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SURF4O15260 269 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SIGLEC5O15389 551 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 CYB5BO43169 146 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 STK17BO94768 372 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 AK1P00568 194 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 CXCL2P19875 107 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 HOXA11P31270 313 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 F2RL1P55085 397 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 TAS2R20P59543 309 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SNRPNP63162 240 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 YBX1P67809 324 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SIGLEC14Q08ET2 396 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SLC18B1Q6NT16 456 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF550Q7Z398 422 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 OR10D4PQ8NGN7 298 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SP7Q8TDD2 431 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 C2orf15Q8WU43 125 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 WDR89Q96FK6 387 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 DGAT2Q96PD7 388 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 MAP3K3Q99759 626 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 FAM212BQ9NTI7 297 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 UQCC1Q9NVA1 299 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 HAO2Q9NYQ3 351 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 FAM96BQ9Y3D0 163 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 HKR1P10072 659 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ERV3-1Q14264 604 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 DEFB134Q4QY38 66 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 CNKSR3Q6P9H4 555 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF813Q6ZN06 617 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 BAP18Q8IXM2 172 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF709Q8N972 641 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 OR11G2Q8NGC1 345 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 RSPRY1Q96DX4 576 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZMAT3Q9HA38 289 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 GDE1Q9NZC3 331 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 PIPOXQ9P0Z9 390 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF443Q9Y2A4 671 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 TP53TG5Q9Y2B4 290 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 NUP214P35658 2090 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 CXorf65A6NEN9 183 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 B4GALT2O60909 372 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 QDPRP09417 244 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 HLA-GP17693 338 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 AGAP20933 346 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 CX3CR1P49238 355 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 MVDP53602 400 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 WNT3P56703 355 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 CTXN1P60606 82 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 PPIAP62937 165 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 FOXK2Q01167 660 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 DECR1Q16698 335 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 Q499Y3 187 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 WDR88Q6ZMY6 472 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 LDLRAD3Q86YD5 345 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 OR4K15Q8NH41 348 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 SH3RF2Q8TEC5 729 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF689Q96CS4 500 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ABHD1Q96SE0 405 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 MVB12BQ9H7P6 319 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 PATZ1Q9HBE1 687 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 COL11A1P12107 1806 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 RNF222A6NCQ9 220 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZBTB42B2RXF5 422 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF587BE7ETH6 402 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 H7C1C5 153 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 TERTO14746 1132 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 FGF16O43320 207 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 DOK2O60496 412 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 PRKRAO75569 313 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ADH1CP00326 375 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms