RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 MARVELD3Q96A59 401 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 CREB3L1Q96BA8 519 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 NEDD4LQ96PU5 975 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 RASL10BQ96S79 203 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 OR11A1Q9GZK7 315 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 FSCN3Q9NQT6 498 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 ZNF275Q9NSD4 429 aaPredicted RBP12.21□□□□□ -0.45
SMG6-203ENST00000536871 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 MALT1Q9UDY8 824 aa12.21□□□□□ -0.45
SMG6-203ENST00000536871 ARID1BQ8NFD5 2236 aaPredicted RBP12.21□□□□□ -0.45
SMG6-203ENST00000536871 IGHV1-45A0A0A0MS14 117 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 A0A0G2JMP0 313 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 A0A0X1KG70 313 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 MS4A18H0YCH9 400 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 DKK1O94907 266 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 RPP14O95059 124 aaKnown RBP12.21□□□□□ -0.46
SMG6-203ENST00000536871 LDOC1O95751 146 aaPredicted RBP12.21□□□□□ -0.46
SMG6-203ENST00000536871 TFPIP10646 304 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 RIDAP52758 137 aaKnown RBP12.21□□□□□ -0.46
SMG6-203ENST00000536871 HSF1Q00613 529 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 OR7A5Q15622 319 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.46
SMG6-203ENST00000536871 MS4A18Q3C1V0 323 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 LYPD4Q6UWN0 246 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 OR4M2Q8NGB6 313 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 OR4K17Q8NGC6 315 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.46
SMG6-203ENST00000536871 LOXL4Q96JB6 756 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 C4orf45Q96LM5 186 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 C5orf34Q96MH7 638 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 GALNT9Q9HCQ5 603 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 B3GAT2Q9NPZ5 323 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 STMN3Q9NZ72 180 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 KLHDC2Q9Y2U9 406 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 AK6Q9Y3D8 172 aaKnown RBP12.21□□□□□ -0.46
SMG6-203ENST00000536871 HDGFL3Q9Y3E1 203 aa12.21□□□□□ -0.46
SMG6-203ENST00000536871 TRBV5-7A0A0A0MS05 114 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 LINC00854A0A1B0GVQ3 168 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 TRABD2BA6NFA1 517 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 B8ZZF3 427 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 ZNF354AO60765 605 aaPredicted RBP12.2□□□□□ -0.46
SMG6-203ENST00000536871 PLGP00747 810 aaPredicted RBP12.2□□□□□ -0.46
SMG6-203ENST00000536871 ICAM2P13598 275 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 PTGDSP41222 190 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 KIR2DL3P43628 341 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 CLDN20P56880 219 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 RAB25P57735 213 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 BTG1P62324 171 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 ADAM8P78325 824 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 DBPQ10586 325 aaPredicted RBP12.2□□□□□ -0.46
SMG6-203ENST00000536871 PCK2Q16822 640 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 RSBN1Q5VWQ0 802 aaPredicted RBP12.2□□□□□ -0.46
SMG6-203ENST00000536871 FAM198BQ6UWH4 519 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 DBX2Q6ZNG2 339 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 SLC35D2Q76EJ3 337 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 SPATC1Q76KD6 591 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 KRT77Q7Z794 578 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 FADS6Q8N9I5 356 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 DTWD2Q8NBA8 298 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 OR2M3Q8NG83 312 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 DEDD2Q8WXF8 326 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 IMMP1LQ96LU5 166 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 RBP7Q96R05 134 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 KCNK17Q96T54 332 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 MARVELD1Q9BSK0 173 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 ULBP3Q9BZM4 244 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 ABCG5Q9H222 651 aa12.2□□□□□ -0.46
SMG6-203ENST00000536871 PTRH2Q9Y3E5 179 aaKnown RBP12.2□□□□□ -0.46
SMG6-203ENST00000536871 LOC102725191A0A1B0GVB3 256 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 PRR32B1ATL7 298 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 PIN1P1O15428 100 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 SSX4O60224 188 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 MTRF1O75570 445 aaKnown RBP12.19□□□□□ -0.46
SMG6-203ENST00000536871 CD2P06729 351 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 CTLA4P16410 223 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 PTGS2P35354 604 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 MNDAP41218 407 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 FOLR3P41439 243 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 AP3S2P59780 193 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 MEP1BQ16820 701 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 SLC22A10Q63ZE4 541 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 ARSKQ6UWY0 536 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 STAC2Q6ZMT1 411 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 C16orf47Q6ZP98 133 aaPredicted RBP12.19□□□□□ -0.46
SMG6-203ENST00000536871 ARMC10Q8N2F6 343 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 OR10G3Q8NGC4 313 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 OR52N5Q8NH56 324 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 RGP1Q92546 391 aaPredicted RBP12.19□□□□□ -0.46
SMG6-203ENST00000536871 C8orf44Q96CB5 159 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 S100A16Q96FQ6 103 aaKnown RBP12.19□□□□□ -0.46
SMG6-203ENST00000536871 GTPBP2Q9BX10 602 aaKnown RBP12.19□□□□□ -0.46
SMG6-203ENST00000536871 TSPAN10Q9H1Z9 355 aaPredicted RBP12.19□□□□□ -0.46
SMG6-203ENST00000536871 ELOVL3Q9HB03 270 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 SLC39A1Q9NY26 324 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 SLCO1C1Q9NYB5 712 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 VDAC3Q9Y277 283 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 PCDHGA9Q9Y5G4 932 aaKnown RBP12.19□□□□□ -0.46
SMG6-203ENST00000536871 PCDHGA5Q9Y5G8 931 aa12.19□□□□□ -0.46
SMG6-203ENST00000536871 RP1P56715 2156 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms