RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RAB39AQ14964 217 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 MSMPQ1L6U9 139 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 SPATS1Q496A3 300 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 ZBED5Q49AG3 693 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 C10orf128Q5T292 105 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 SLC25A47Q6Q0C1 308 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 THSD4Q6ZMP0 1018 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 PIWIL3Q7Z3Z3 882 aaKnown RBP11.4□□□□□ -0.58
PRKDC-206ENST00000536429 FBXO17Q96EF6 278 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 KCNS3Q9BQ31 491 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 IL1RAPQ9NPH3 570 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 CA10Q9NS85 328 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 ACTR3BQ9P1U1 418 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 HEATR1Q9H583 2144 aaKnown RBP11.39□□□□□ -0.59
PRKDC-206ENST00000536429 CENPBD1B2RD01 187 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 SMAD7O15105 426 aaKnown RBP11.39□□□□□ -0.59
PRKDC-206ENST00000536429 UBOX5O94941 541 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 UBL3O95164 117 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 OR8G3PP0DMU2 310 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 ITGA2P17301 1181 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 PAX7P23759 505 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 RRM2P31350 389 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 THBS4P35443 961 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 ADIPOQQ15848 244 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 SWI5Q1ZZU3 235 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 MESTQ5EB52 335 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 KRT80Q6KB66 452 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 RRM2BQ7LG56 351 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 TRPM8Q7Z2W7 1104 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 FAM122BQ7Z309 247 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 ZER1Q7Z7L7 766 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 ZDHHC21Q8IVQ6 265 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 CDK20Q8IZL9 346 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 LRRC18Q8N456 261 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 NANOS1Q8WY41 292 aaKnown RBP11.39□□□□□ -0.59
PRKDC-206ENST00000536429 NABP1Q96AH0 204 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 MCUR1Q96AQ8 359 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 CCDC124Q96CT7 223 aaKnown RBP11.39□□□□□ -0.59
PRKDC-206ENST00000536429 TRMT61AQ96FX7 289 aaKnown RBP11.39□□□□□ -0.59
PRKDC-206ENST00000536429 RSRC1Q96IZ7 334 aaKnown RBP11.39□□□□□ -0.59
PRKDC-206ENST00000536429 C18orf12Q96KH6 178 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 COX4I2Q96KJ9 171 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 Q96M85 177 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 MOV10Q9HCE1 1003 aaKnown RBP11.39□□□□□ -0.59
PRKDC-206ENST00000536429 SIGLEC7Q9Y286 467 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 TMEM5Q9Y2B1 443 aa11.39□□□□□ -0.59
PRKDC-206ENST00000536429 UNC119BA6NIH7 251 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 GPRIN2O60269 458 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 LY6HO94772 140 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 GADD45GO95257 159 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 RAB36O95755 333 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 CD14P08571 375 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 INHBBP09529 407 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 OR4A8P0C604 315 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 CCL2P13500 99 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 ZNF35P13682 527 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 RPL4P36578 427 aaKnown RBP11.38□□□□□ -0.59
PRKDC-206ENST00000536429 SERPINF1P36955 418 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 ZNF84P51523 738 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 SNTB2Q13425 540 aaKnown RBP11.38□□□□□ -0.59
PRKDC-206ENST00000536429 TNK1Q13470 666 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 TAF11Q15544 211 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 CLEC12BQ2HXU8 276 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 ANKDD1AQ495B1 522 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 LCN8Q6JVE9 175 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 SLC16A14Q7RTX9 510 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 HDDC2Q7Z4H3 204 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 PAQR4Q8N4S7 273 aaPredicted RBP11.38□□□□□ -0.59
PRKDC-206ENST00000536429 ARIH2OSQ8N7S6 290 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 OR4F15Q8NGB8 312 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 RASD2Q96D21 266 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 ALG12Q9BV10 488 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 STX18Q9P2W9 335 aaKnown RBP11.38□□□□□ -0.59
PRKDC-206ENST00000536429 TLN2Q9Y4G6 2542 aa11.38□□□□□ -0.59
PRKDC-206ENST00000536429 TEX13CA0A0J9YWL9 993 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 NDUFB2O95178 105 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 SCG5P05408 212 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 MMP7P09237 267 aaPredicted RBP11.37□□□□□ -0.59
PRKDC-206ENST00000536429 FOSL1P15407 271 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 MAGEA2P43356 314 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 DBPQ10586 325 aaPredicted RBP11.37□□□□□ -0.59
PRKDC-206ENST00000536429 PPP1R8Q12972 351 aaKnown RBP11.37□□□□□ -0.59
PRKDC-206ENST00000536429 TRIM25Q14258 630 aaKnown RBP11.37□□□□□ -0.59
PRKDC-206ENST00000536429 ETFDHQ16134 617 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 OTPQ5XKR4 325 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 DNM1P46Q6ZS02 220 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 Q71RC1 249 aaPredicted RBP11.37□□□□□ -0.59
PRKDC-206ENST00000536429 DHFR2Q86XF0 187 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 ARHGAP24Q8N264 748 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 MAPK1IP1LQ8NDC0 245 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 FOXN4Q96NZ1 517 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 THTPAQ9BU02 230 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 RNF121Q9H920 327 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 SMURF2Q9HAU4 748 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 VNN3Q9NY84 501 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 PRPF19Q9UMS4 504 aaKnown RBP11.37□□□□□ -0.59
PRKDC-206ENST00000536429 AURKCQ9UQB9 309 aa11.37□□□□□ -0.59
PRKDC-206ENST00000536429 C2CD3Q4AC94 2353 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 TMEM129A0AVI4 362 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms