RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 HTR1FP30939 366 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 CD96P40200 585 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 F2RL1P55085 397 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 OR7A5Q15622 319 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 ADAM5Q6NVV9 412 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 DPPA2Q7Z7J5 298 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 RSC1A1Q92681 617 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 HIST1H2BAQ96A08 127 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 SLC35A4Q96G79 324 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 SEC22AQ96IW7 307 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 C4orf36Q96KX1 117 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 TCF7L1Q9HCS4 588 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 RPS10P5Q9NQ39 176 aa12.73□□□□□ -0.37
LIG1-203ENST00000536218 A0A087WUU8 490 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 A6NLC8 198 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 MAGEB4O15481 346 aaPredicted RBP12.72□□□□□ -0.37
LIG1-203ENST00000536218 MT-ND5P03915 603 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 DLSTP36957 453 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 RABIFP47224 123 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 ANXA11P50995 505 aaKnown RBP12.72□□□□□ -0.37
LIG1-203ENST00000536218 PDX1P52945 283 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 USF2Q15853 346 aaPredicted RBP12.72□□□□□ -0.37
LIG1-203ENST00000536218 GFOD2Q3B7J2 385 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 ENTPD8Q5MY95 495 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 LRRC25Q8N386 305 aaPredicted RBP12.72□□□□□ -0.37
LIG1-203ENST00000536218 NUBPLQ8TB37 319 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 CDS1Q92903 461 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 ZNF764Q96H86 408 aaPredicted RBP12.72□□□□□ -0.37
LIG1-203ENST00000536218 CCDC3Q9BQI4 270 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 SLITRK2Q9H156 845 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 OR51V1Q9H2C8 321 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 IL21RQ9HBE5 538 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 MAN2C1Q9NTJ4 1040 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 SYNDIG1LA6NDD5 238 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 AGPAT2O15120 278 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 TLX1P31314 330 aaPredicted RBP12.72□□□□□ -0.37
LIG1-203ENST00000536218 PTH2RP49190 550 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 OR12D2P58182 307 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 TAS2R60P59551 318 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 CSRP2Q16527 193 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 TMEM64Q6YI46 380 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 TMED4Q7Z7H5 227 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 SLC25A18Q9H1K4 315 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 HRH4Q9H3N8 390 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 UCK1Q9HA47 277 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 DAPP1Q9UN19 280 aa12.72□□□□□ -0.37
LIG1-203ENST00000536218 hCG_1809904A0A1W2PP81 198 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 A0A1W2PR64 198 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 A0A1W2PRV1 198 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 SURF4O15260 269 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 BCL2L11O43521 198 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 HEXAP06865 529 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 GKN3PP0CG01 181 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 TAS2R41P59536 307 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 HHEXQ03014 270 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 CBFBQ13951 182 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 ELAVL1Q15717 326 aaKnown RBP12.71□□□□□ -0.37
LIG1-203ENST00000536218 KIAA0895LQ68EN5 471 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 ARRDC1Q8N5I2 433 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 MORN4Q8NDC4 146 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 TMEM52Q8NDY8 209 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 LAT2Q9GZY6 243 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 EXO5Q9H790 373 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 COMMD9Q9P000 198 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 EXOGQ9Y2C4 368 aaKnown RBP12.71□□□□□ -0.37
LIG1-203ENST00000536218 HS3ST3A1Q9Y663 406 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 ANKRD20A5PA0PJZ0 165 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 TRAPPC13A5PLN9 417 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 MEIS3P1A6NDR6 274 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 CTDSPLO15194 276 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 NT5EP21589 574 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 AGTR1P30556 359 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 RNF4P78317 190 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 FZD2Q14332 565 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 CD300LDQ6UXZ3 194 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 SEC11CQ9BY50 192 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 ALX4Q9H161 411 aaPredicted RBP12.71□□□□□ -0.37
LIG1-203ENST00000536218 FAM60AQ9NP50 221 aa12.71□□□□□ -0.37
LIG1-203ENST00000536218 NPIPA5A0A0B4J1W7 369 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 OR5H14A6NHG9 310 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 NPIPA7E9PJI5 369 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 IMPA2O14732 288 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 YIF1AO95070 293 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 SLC34A2O95436 690 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 NPIPA8P0DM63 369 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 P2RX1P51575 399 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 PCGF3Q3KNV8 242 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 GLT8D1Q68CQ7 371 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 SFXN5Q8TD22 340 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 GPBAR1Q8TDU6 330 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 SLC25A38Q96DW6 304 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 SERINC2Q96SA4 455 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 ACTRT3Q9BYD9 372 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 PRO1933Q9H354 126 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 LMAN1LQ9HAT1 526 aa12.71□□□□□ -0.38
LIG1-203ENST00000536218 ABCA7Q8IZY2 2146 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms