RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PCGF3Q3KNV8 242 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 LIPNQ5VXI9 398 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 LRFN4Q6PJG9 635 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 UNQ6126/PRO20091Q6UXV3 157 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 DEF8Q6ZN54 512 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 IL17RELQ6ZVW7 336 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 WDFY1Q8IWB7 410 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 OR4K5Q8NGD3 323 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 TMEM239Q8WW34 195 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 SGTBQ96EQ0 304 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 BCL2L14Q9BZR8 327 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 SMURF2Q9HAU4 748 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 MEPEQ9NQ76 525 aaPredicted RBP11.28□□□□□ -0.6
RTN3-207ENST00000536011 INIPQ9NRY2 104 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 SLCO1C1Q9NYB5 712 aa11.28□□□□□ -0.6
RTN3-207ENST00000536011 B4DSR2 109 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 FBP2O00757 339 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 TFP02787 698 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 IGFBP1P08833 259 aaPredicted RBP11.27□□□□□ -0.61
RTN3-207ENST00000536011 PATE4P0C8F1 98 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 FUT1P19526 365 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 APLNRP35414 380 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.61
RTN3-207ENST00000536011 ALDH3B1P43353 468 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 GZMMP51124 257 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 DVL1P1P54792 670 aaPredicted RBP11.27□□□□□ -0.61
RTN3-207ENST00000536011 TMEM33P57088 247 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 HSF2Q03933 536 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 RPL18Q07020 188 aaKnown RBP11.27□□□□□ -0.61
RTN3-207ENST00000536011 HIST3H3Q16695 136 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 RABL3Q5HYI8 236 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 TMEM154Q6P9G4 183 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 GLCCI1Q86VQ1 547 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.61
RTN3-207ENST00000536011 CALHM3Q86XJ0 350 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 ZNF584Q8IVC4 421 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 RBM15BQ8NDT2 890 aaKnown RBP11.27□□□□□ -0.61
RTN3-207ENST00000536011 ZNF519Q8TB69 540 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 SYNPRQ8TBG9 265 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 ASB10Q8WXI3 467 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 C11orf40Q8WZ69 217 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 LZICQ8WZA0 190 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 MCHR2Q969V1 340 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 C1orf159Q96HA4 380 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 SEPHS2Q99611 448 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 TMEFF2Q9UIK5 374 aaPredicted RBP11.27□□□□□ -0.61
RTN3-207ENST00000536011 RIMS3Q9UJD0 308 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 AP3M1Q9Y2T2 418 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 MED31Q9Y3C7 131 aa11.27□□□□□ -0.61
RTN3-207ENST00000536011 FXYD1O00168 92 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 F13BP05160 661 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 LCKP06239 509 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 SAGP10523 405 aaPredicted RBP11.26□□□□□ -0.61
RTN3-207ENST00000536011 H2AFXP16104 143 aaPredicted RBP11.26□□□□□ -0.61
RTN3-207ENST00000536011 ACADSP16219 412 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 GUCA1AP43080 201 aaPredicted RBP11.26□□□□□ -0.61
RTN3-207ENST00000536011 ARFIP2P53365 341 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 CRYBA2P53672 197 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 UGT2B15P54855 530 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 TEKQ02763 1124 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 CCNIQ14094 377 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 MAD2L1BPQ15013 274 aaPredicted RBP11.26□□□□□ -0.61
RTN3-207ENST00000536011 TAF11Q15544 211 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 LRRC23Q53EV4 343 aaPredicted RBP11.26□□□□□ -0.61
RTN3-207ENST00000536011 ELFN2Q5R3F8 820 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 C10orf128Q5T292 105 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 RFLNBQ8N5W9 214 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 SYT14Q8NB59 555 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 PFN4Q8NHR9 129 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 FNDC8Q8TC99 324 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 TMEM255BQ8WV15 326 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 LIPHQ8WWY8 451 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 ZNF347Q96SE7 839 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 MRPL13Q9BYD1 178 aaKnown RBP11.26□□□□□ -0.61
RTN3-207ENST00000536011 SIAEQ9HAT2 523 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 CCNB1IP1Q9NPC3 277 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 HINT3Q9NQE9 182 aaKnown RBP11.26□□□□□ -0.61
RTN3-207ENST00000536011 TAAR3PQ9P1P4 343 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 FZR1Q9UM11 496 aa11.26□□□□□ -0.61
RTN3-207ENST00000536011 FAM220BPB1ANY3 271 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 SLC22A2O15244 555 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 HPXP02790 462 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 FAM157BP0CG42 384 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 NAT2P11245 290 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 ZNF250P15622 560 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 TCN1P20061 433 aaPredicted RBP11.25□□□□□ -0.61
RTN3-207ENST00000536011 DRD4P21917 467 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 IL2RGP31785 369 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 AQP2P41181 271 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 ZNF133P52736 654 aaPredicted RBP11.25□□□□□ -0.61
RTN3-207ENST00000536011 UCP2P55851 309 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
RTN3-207ENST00000536011 CD47Q08722 323 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 ST3GAL3Q11203 375 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 KLF10Q13118 480 aa11.25□□□□□ -0.61
RTN3-207ENST00000536011 PIN1Q13526 163 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms