RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PFN3P60673 137 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 OR6V1Q8N148 313 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 SMAP2Q8WU79 429 aaPredicted RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 SLC22A23A1A5C7 686 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 RAB19A4D1S5 217 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 FAM157BP0CG42 384 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 REEP5Q00765 189 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 YOD1Q5VVQ6 348 aaPredicted RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 GDPD3Q7L5L3 318 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 KIAA1958Q8N8K9 716 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 PLPP5Q8NEB5 264 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 C8orf44Q96CB5 159 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 PBX4Q9BYU1 374 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 CHST6Q9GZX3 395 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 ZNF230Q9UIE0 474 aaPredicted RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 EDIL3O43854 480 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 GALR3O60755 368 aaPredicted RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 ENPP1P22413 925 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 GABREP78334 506 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 MEF2DQ14814 521 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 HAGHQ16775 308 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 C4orf17Q53FE4 359 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 FAM219BQ5XKK7 198 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 GDF7Q7Z4P5 450 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 UBE2FQ969M7 185 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 AMDHD1Q96NU7 426 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 SPACA5Q96QH8 159 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 LRP5LA4QPB2 252 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 DEGS1O15121 323 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 UBBP0CG47 229 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 UBCP0CG48 685 aaKnown RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 ZNF597Q96LX8 424 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 C1orf123Q9NWV4 160 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 CHD2O14647 1828 aaKnown RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 FOXE1O00358 373 aaPredicted RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 ARHGAP33O14559 1287 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 EIF2DP41214 584 aaKnown RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 THBS3P49746 956 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 MPEG1Q2M385 716 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 KCTD11Q693B1 232 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 UBL7Q96S82 380 aaPredicted RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 GOLT1BQ9Y3E0 138 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 ASCC3Q8N3C0 2202 aaKnown RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 A0A1B0GWA3 101 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 LINC01565O15544 149 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 MMP12P39900 470 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 MFSD12Q6NUT3 480 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 ANKLE1Q8NAG6 615 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 GHSRQ92847 366 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 CCDC74AQ96AQ1 378 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 LCORQ96JN0 433 aaPredicted RBP11.62□□□□□ -0.55
SPG11-203ENST00000535302 MS4A8Q9BY19 250 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 GHRLQ9UBU3 117 aa11.62□□□□□ -0.55
SPG11-203ENST00000535302 GPR137BO60478 399 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 CSO75390 466 aaKnown RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 SULT1C4O75897 302 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 GUSBP08236 651 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 LIM2P55344 173 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 PCBD1P61457 104 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 CCL4L1Q8NHW4 92 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 DHRS9Q9BPW9 319 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 NXF2Q9GZY0 626 aaKnown RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 SEMA6CQ9H3T2 930 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 CLEC2LP0C7M8 214 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 CST5P28325 142 aaPredicted RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 HOXC13P31276 330 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 MFGE8Q08431 387 aaPredicted RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 TSPAN31Q12999 210 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 CRMP1Q14194 572 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 SFT2D1Q8WV19 159 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 RNF170Q96K19 258 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 TRIB1Q96RU8 372 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 CENPOQ9BU64 300 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 SEMA4GQ9NTN9 838 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 FZR1Q9UM11 496 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 UBR2Q8IWV8 1755 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 CDK4P11802 303 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 GIPRP48546 466 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 GLYR1Q49A26 553 aaPredicted RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 TRMT12Q53H54 448 aaKnown RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 TMEM207Q6UWW9 146 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 SKA3Q8IX90 412 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 RAB39BQ96DA2 213 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 OR5M11Q96RB7 305 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 C1GALT1Q9NS00 363 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 THAP10Q9P2Z0 257 aaPredicted RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPG11-203ENST00000535302 FAM69AQ5T7M9 428 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 MBOAT2Q6ZWT7 520 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 NINQ8N4C6 2090 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 A0A087WV62 115 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 IAPPP10997 89 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 Q6ZSR9 355 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 WFDC8Q8IUA0 241 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 OR10G3Q8NGC4 313 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 FYTTD1Q96QD9 318 aaKnown RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 TBC1D29Q9UFV1 150 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 NRXN3Q9Y4C0 1643 aa11.61□□□□□ -0.55
SPG11-203ENST00000535302 ELAVL4P26378 380 aaKnown RBP11.61□□□□□ -0.55
SPG11-203ENST00000535302 CSNK1G2P78368 415 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms