RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 ROR2Q01974 943 aaKnown RBP9.97□□□□□ -0.81
CTNND1-238ENST00000534647 LARS2Q15031 903 aaKnown RBP9.97□□□□□ -0.81
CTNND1-238ENST00000534647 FAM98BQ52LJ0 330 aaKnown RBP9.97□□□□□ -0.81
CTNND1-238ENST00000534647 NIPAL3Q6P499 406 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 ZNF836Q6ZNA1 936 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 CALHM3Q86XJ0 350 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 VRK2Q86Y07 508 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 CLIP4Q8N3C7 705 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 CADM2Q8N3J6 435 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 UBASH3BQ8TF42 649 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 CANT1Q8WVQ1 401 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 OXGR1Q96P68 337 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 ALKBH3Q96Q83 286 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-238ENST00000534647 VCXQ9H320 206 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 IKZF5Q9H5V7 419 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 ARMC7Q9H6L4 198 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 GORASP2Q9H8Y8 452 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 ARMC1Q9NVT9 282 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 P2RX2Q9UBL9 471 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 USP22Q9UPT9 525 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 CHST2Q9Y4C5 530 aa9.97□□□□□ -0.81
CTNND1-238ENST00000534647 IGHV2OR16-5A0A0B4J2B6 119 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 A0A0G2JPF8 293 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 HNRNPCL2B2RXH8 293 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 HNRNPCL3B7ZW38 293 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 J3KRW8 73 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 SLC43A1O75387 559 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 AHSA1O95433 338 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 HNRNPCL4P0DMR1 293 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 PNMTP11086 282 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 PRG2P13727 222 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 ZNF43P17038 809 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 HOXB6P17509 224 aaKnown RBP9.96□□□□□ -0.82
CTNND1-238ENST00000534647 FASP25445 335 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 APEX1P27695 318 aaKnown RBP9.96□□□□□ -0.82
CTNND1-238ENST00000534647 IL2RGP31785 369 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 CRATP43155 626 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 EGR4Q05215 589 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 TAF11Q15544 211 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-238ENST00000534647 CFAP161Q6P656 301 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 C5orf46Q6UWT4 87 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 ZNF627Q7L945 461 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 PNPT1Q8TCS8 783 aaKnown RBP9.96□□□□□ -0.82
CTNND1-238ENST00000534647 SLC38A5Q8WUX1 472 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 DNAJC9Q8WXX5 260 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 PKP2Q99959 881 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 PTDSS2Q9BVG9 487 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 SEC61A2Q9H9S3 476 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 C12orf10Q9HB07 376 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 GPR35Q9HC97 309 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 B3GNT2Q9NY97 397 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 B3GAT1Q9P2W7 334 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 ZNF443Q9Y2A4 671 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-238ENST00000534647 LRCH1Q9Y2L9 728 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 IFT52Q9Y366 437 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 GMEB1Q9Y692 573 aa9.96□□□□□ -0.82
CTNND1-238ENST00000534647 TCRBV5S2A0A599 114 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 ZNF99A8MXY4 864 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-238ENST00000534647 B4DSR2 109 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 CASQ2O14958 399 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-238ENST00000534647 OR2T1O43869 369 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 CELA3BP08861 270 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 NR4A1P22736 598 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 SRP14P37108 136 aaKnown RBP9.95□□□□□ -0.82
CTNND1-238ENST00000534647 GZMMP51124 257 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 CLDN17P56750 224 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 TUBA1BP68363 451 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 TUBA4AP68366 448 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 RBBP4Q09028 425 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 FADDQ13158 208 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 RGNQ15493 299 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 ADRM1Q16186 407 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 VMACQ2NL98 169 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 GCNT6Q5T4J0 391 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 TUBA1AQ71U36 451 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 MYPOPQ86VE0 399 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-238ENST00000534647 SLC30A8Q8IWU4 369 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 ADGRG5Q8IZF4 528 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 ZCCHC24Q8N2G6 241 aaKnown RBP9.95□□□□□ -0.82
CTNND1-238ENST00000534647 SVOPLQ8N434 492 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 LSMEM1Q8N8F7 131 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 NRG4Q8WWG1 115 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 LRR1Q96L50 414 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 SEPHS2Q99611 448 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 RACGAP1Q9H0H5 632 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 MS4A5Q9H3V2 200 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 CRLF2Q9HC73 371 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 BCL2L10Q9HD36 194 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 RPS6KA6Q9UK32 745 aa9.95□□□□□ -0.82
CTNND1-238ENST00000534647 SAMD4AQ9UPU9 718 aaKnown RBP9.95□□□□□ -0.82
CTNND1-238ENST00000534647 ZNF503-AS2A6NEH8 195 aa9.94□□□□□ -0.82
CTNND1-238ENST00000534647 SYNGR3O43761 229 aa9.94□□□□□ -0.82
CTNND1-238ENST00000534647 TIPRLO75663 272 aa9.94□□□□□ -0.82
CTNND1-238ENST00000534647 TUSC2O75896 110 aa9.94□□□□□ -0.82
CTNND1-238ENST00000534647 ADRA2AP08913 450 aa9.94□□□□□ -0.82
CTNND1-238ENST00000534647 RAP2AP10114 183 aa9.94□□□□□ -0.82
CTNND1-238ENST00000534647 ZNF35P13682 527 aa9.94□□□□□ -0.82
CTNND1-238ENST00000534647 ETFAP13804 333 aa9.94□□□□□ -0.82
CTNND1-238ENST00000534647 IFNGR1P15260 489 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms