RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 THEM4Q5T1C6 240 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 GPR139Q6DWJ6 353 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 LINC00471Q8N535 108 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 ARIH2OSQ8N7S6 290 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 ZNF519Q8TB69 540 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 HDAC2Q92769 488 aaKnown RBP13.77□□□□□ -0.21
TSKU-204ENST00000533752 TSPAN32Q96QS1 320 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 RBP7Q96R05 134 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 GPX7Q96SL4 187 aaPredicted RBP13.77□□□□□ -0.21
TSKU-204ENST00000533752 CBLN4Q9NTU7 201 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 GRHPRQ9UBQ7 328 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 ZNF346Q9UL40 294 aaKnown RBP13.77□□□□□ -0.21
TSKU-204ENST00000533752 SIGLEC7Q9Y286 467 aa13.77□□□□□ -0.21
TSKU-204ENST00000533752 TEP1Q99973 2627 aaKnown RBP13.77□□□□□ -0.21
TSKU-204ENST00000533752 USF3Q68DE3 2245 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 FLNAP21333 2647 aaKnown RBP13.76□□□□□ -0.21
TSKU-204ENST00000533752 ZNF503-AS2A6NEH8 195 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 UNC119BA6NIH7 251 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 XKRYO14609 159 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 FPR3P25089 353 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
TSKU-204ENST00000533752 GUCA1AP43080 201 aaPredicted RBP13.76□□□□□ -0.21
TSKU-204ENST00000533752 PTDSS1P48651 473 aaKnown RBP13.76□□□□□ -0.21
TSKU-204ENST00000533752 MRPS34P82930 218 aaKnown RBP13.76□□□□□ -0.21
TSKU-204ENST00000533752 MYBPC1Q00872 1141 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 ETFDHQ16134 617 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 TMEM53Q6P2H8 277 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 IGFN1Q86VF2 1251 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 NUP37Q8NFH4 326 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 FANK1Q8TC84 345 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 NMD3Q96D46 503 aaKnown RBP13.76□□□□□ -0.21
TSKU-204ENST00000533752 ZNF570Q96NI8 536 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 KCNN2Q9H2S1 579 aa13.76□□□□□ -0.21
TSKU-204ENST00000533752 IGHV2OR16-5A0A0B4J2B6 119 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 VSTM5A8MXK1 200 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 PTP4A3O75365 173 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 CELA3BP08861 270 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 CD99P14209 185 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 SDHAP31040 664 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 GIPRP48546 466 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 RASSF2P50749 326 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 RAB1AP62820 205 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 ERVK-25P63136 954 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 MS4A2Q01362 244 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 PIGFQ07326 219 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 GK3PQ14409 553 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 DPY19L2P2Q6ZN68 376 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 SLC16A14Q7RTX9 510 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 YTHDF3Q7Z739 585 aaKnown RBP13.75□□□□□ -0.21
TSKU-204ENST00000533752 KRTAP1-3Q8IUG1 177 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 SKA3Q8IX90 412 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 WFDC11Q8NEX6 87 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 CLPTM1LQ96KA5 538 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 BTBD10Q9BSF8 475 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 C1orf198Q9H425 327 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 ZNF442Q9H7R0 627 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 SIAEQ9HAT2 523 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 BARX1Q9HBU1 254 aaPredicted RBP13.75□□□□□ -0.21
TSKU-204ENST00000533752 CA10Q9NS85 328 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 ZNF224Q9NZL3 707 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 FBXO9Q9UK97 447 aaPredicted RBP13.75□□□□□ -0.21
TSKU-204ENST00000533752 SPEF1Q9Y4P9 236 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 LYVE1Q9Y5Y7 322 aa13.75□□□□□ -0.21
TSKU-204ENST00000533752 HEATR1Q9H583 2144 aaKnown RBP13.75□□□□□ -0.21
TSKU-204ENST00000533752 AQP12BA6NM10 295 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 TNFRSF11BO00300 401 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 ATP5HO75947 161 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 SLC2A10O95528 541 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 PTHP01270 115 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 CD8AP01732 235 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 RAP2AP10114 183 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 APEHP13798 732 aaKnown RBP13.74□□□□□ -0.21
TSKU-204ENST00000533752 ZNF14P17017 642 aaPredicted RBP13.74□□□□□ -0.21
TSKU-204ENST00000533752 RPS6KA3P51812 740 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 HMGA2P52926 109 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 FMODQ06828 376 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 C11orf71Q6IPW1 123 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 SMARCD3Q6STE5 483 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 FAM122BQ7Z309 247 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 ZER1Q7Z7L7 766 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 ADCK1Q86TW2 530 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 AQP12AQ8IXF9 295 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 TMUB1Q9BVT8 246 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 REEP1Q9H902 201 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 NOX3Q9HBY0 568 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 NRIP3Q9NQ35 241 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 ADAM18Q9Y3Q7 739 aa13.74□□□□□ -0.21
TSKU-204ENST00000533752 MTORP42345 2549 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 PRSS37A4D1T9 235 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 ACOT8O14734 319 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 DNAJC8O75937 253 aaPredicted RBP13.73□□□□□ -0.21
TSKU-204ENST00000533752 SERPINA5P05154 406 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 FOSL1P15407 271 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 ZNF26P17031 533 aaPredicted RBP13.73□□□□□ -0.21
TSKU-204ENST00000533752 CALCRP30988 508 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 SLC6A6P31641 620 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 CDKN1AP38936 164 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 PLP2Q04941 152 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 BNIP1Q12981 228 aa13.73□□□□□ -0.21
TSKU-204ENST00000533752 KRR1Q13601 381 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms