RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CTSVO60911 334 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 SCRG1O75711 98 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 HOXD4P09016 255 aaPredicted RBP11.22□□□□□ -0.61
BDNF-218ENST00000533246 CISD3P0C7P0 127 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 CD34P28906 385 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 GNRHRP30968 328 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 ACTBP60709 375 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 ACTG1P63261 375 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 CSNK2A1P68400 391 aaPredicted RBP11.22□□□□□ -0.61
BDNF-218ENST00000533246 OR2B11Q5JQS5 317 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 ADAM5Q6NVV9 412 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 PPP1R3BQ86XI6 285 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 TEX19Q8NA77 164 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 CSNK2A3Q8NEV1 391 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 DDIT4LQ96D03 193 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 CDCA4Q9BXL8 241 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 EMC9Q9Y3B6 208 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 CCL27Q9Y4X3 112 aa11.22□□□□□ -0.61
BDNF-218ENST00000533246 LINC00862A6NCI5 91 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 TRABD2BA6NFA1 517 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 A6NLC8 198 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 B4DXG7 233 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 ZNF749O43361 778 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 HSD11B2P80365 405 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 FABP9Q0Z7S8 132 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 Q5PR19 223 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 SLC35F3Q8IY50 421 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 C16orf52Q8NHV5 167 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 ZNF707Q96C28 371 aaPredicted RBP11.21□□□□□ -0.61
BDNF-218ENST00000533246 LCORQ96JN0 433 aaPredicted RBP11.21□□□□□ -0.61
BDNF-218ENST00000533246 RHOVQ96L33 236 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 SCGB3A2Q96PL1 93 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 SLC5A7Q9GZV3 580 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 ANKRD19PQ9H560 264 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 B3GAT2Q9NPZ5 323 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 PRDM7Q9NQW5 492 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 TUBG2Q9NRH3 451 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 PLCXD1Q9NUJ7 323 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 TRDV1A0A1B0GX56 115 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 RRASP10301 218 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 NQO2P16083 231 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 ELK1P19419 428 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 RPS15P62841 145 aaKnown RBP11.21□□□□□ -0.61
BDNF-218ENST00000533246 TDGQ13569 410 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 FAM122BQ7Z309 247 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 CCDC54Q8NEL0 328 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 C8orf44Q96CB5 159 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 MFFQ9GZY8 342 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.61
BDNF-218ENST00000533246 TCRBV16S1A1N1A0A5B0 115 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 MEGF11A6BM72 1044 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 CHP2O43745 196 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 SNAPINO95295 136 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 DRD3P35462 400 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 LYSMD4Q5XG99 296 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 YIPF6Q96EC8 236 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 MED17Q9NVC6 651 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 TAS2R8Q9NYW2 309 aa11.21□□□□□ -0.62
BDNF-218ENST00000533246 CACNA1DQ01668 2161 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 A0A0A6YYH2 397 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 A0A0A6YYJ9 748 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 FITM1A5D6W6 292 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 A6NJ64 397 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 GALR3O60755 368 aaPredicted RBP11.2□□□□□ -0.62
BDNF-218ENST00000533246 MAGEB1P43366 347 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 PPP1CAP62136 330 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 SNTB1Q13884 538 aaKnown RBP11.2□□□□□ -0.62
BDNF-218ENST00000533246 RSU1Q15404 277 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 OR51T1Q8NGJ9 327 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 OR4C3Q8NH37 302 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 OR51M1Q9H341 326 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 CGGBP1Q9UFW8 167 aaPredicted RBP11.2□□□□□ -0.62
BDNF-218ENST00000533246 A4GNTQ9UNA3 340 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 PPIL1Q9Y3C6 166 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 B3GALT1Q9Y5Z6 326 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
BDNF-218ENST00000533246 Q5BKY6 102 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 EIF5AL1Q6IS14 154 aaKnown RBP11.2□□□□□ -0.62
BDNF-218ENST00000533246 FAAP20Q6NZ36 180 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 TCTE3Q8IZS6 198 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 PRR18Q8N4B5 295 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 SLC25A46Q96AG3 418 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 GHRLQ9UBU3 117 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 SLC7A11Q9UPY5 501 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 DOPEY2Q9Y3R5 2298 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 COL11A1P12107 1806 aaPredicted RBP11.2□□□□□ -0.62
BDNF-218ENST00000533246 SCN2AQ99250 2005 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 TMED7-TICAM2A0A0A6YYA0 188 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 TRIM77I1YAP6 450 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 TRHRP34981 398 aaPredicted RBP11.2□□□□□ -0.62
BDNF-218ENST00000533246 SLC26A5P58743 744 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 GPR139Q6DWJ6 353 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 OR10K1Q8NGX5 313 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 BMFQ96LC9 184 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 TEX101Q9BY14 249 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 CHRDQ9H2X0 955 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 NT5DC2Q9H857 520 aa11.2□□□□□ -0.62
BDNF-218ENST00000533246 MRPS2Q9Y399 296 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms