RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 LY6G5CQ5SRR4 150 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 FNBP1LQ5T0N5 605 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 GCNT6Q5T4J0 391 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 C1orf194Q5T5A4 169 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SYPL2Q5VXT5 272 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 NADSYN1Q6IA69 706 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 WDR74Q6RFH5 385 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 ZNF562Q6V9R5 426 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SSX6Q7RTT6 188 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 TMEM144Q7Z5S9 345 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 PARGQ86W56 976 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ARHGAP12Q8IWW6 846 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 KLHDC8BQ8IXV7 354 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 CCNYQ8ND76 341 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 OR11H4Q8NGC9 324 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 OR13C4Q8NGS5 318 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SPPL2AQ8TCT8 520 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SLC7A13Q8TCU3 470 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ABHD3Q8WU67 409 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 NEU4Q8WWR8 484 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 ASB17Q8WXJ9 295 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 THAP4Q8WY91 577 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ARNTL2Q8WYA1 636 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 TADA1Q96BN2 335 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 CXorf58Q96LI9 332 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 Q96MF0 132 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 OR7D2Q96RA2 312 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 OR52E6Q96RD3 313 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 C20orf144Q9BQM9 153 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 TMEM43Q9BTV4 400 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 BARHL1Q9BZE3 327 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 OR8D2Q9GZM6 311 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ZNF350Q9GZX5 532 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 TMEM117Q9H0C3 514 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 MMP28Q9H239 520 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 OR51J1Q9H342 316 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SYNPO2LQ9H987 977 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 FN3KRPQ9HA64 309 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 RHOFQ9HBH0 211 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 Q9N2J8 555 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SIX2Q9NPC8 291 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SERHLQ9NQF3 203 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 UBQLN4Q9NRR5 601 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 HEBP1Q9NRV9 189 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 FGF21Q9NSA1 209 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 FAM212BQ9NTI7 297 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 LYRM2Q9NU23 88 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 MARCH5Q9NX47 278 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 OR14J1Q9UGF5 321 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 MUTYHQ9UIF7 546 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 FAM96BQ9Y3D0 163 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 CMAHPQ9Y471 501 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 NME7Q9Y5B8 376 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 TIMM10BQ9Y5J6 103 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SPIN1Q9Y657 262 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 COL1A2P08123 1366 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 DOCK1Q14185 1865 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 LMO7Q8WWI1 1683 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 TRAV34A0A0B4J273 112 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 HELTA6NFD8 242 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 E9PQ18 207 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 F5H697 171 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 F6UZH7 168 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 PYCARD-AS1I3L0S3 204 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 TNFRSF11BO00300 401 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 GOSR2O14653 212 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 FGF16O43320 207 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 TCF21O43680 179 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 RBMXL2O75526 392 aaKnown RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 MMP23AO75900 390 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 GLSO94925 669 aaPredicted RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 SYNGR4O95473 234 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 NDUFB10O96000 172 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 MT-ATP6P00846 226 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 TGFAP01135 160 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 TK1P04183 234 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ADH4P08319 380 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 SLC35G4P0C7Q5 338 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 LAMP2P13473 410 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 NELFEP18615 380 aaKnown RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 BMP5P22003 454 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 AGTR1P30556 359 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 CEACAM8P31997 349 aaPredicted RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 AQP2P41181 271 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 VIPR2P41587 438 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 AGTR2P50052 363 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 PPT1P50897 306 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 RPL14P50914 215 aaKnown RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 BLKP51451 505 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 STXBP1P61764 594 aaKnown RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 ZXDAP98168 799 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 CDK6Q00534 326 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 FKBP3Q00688 224 aaKnown RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 CD47Q08722 323 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ZNF543Q08ER8 600 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 RAB31Q13636 194 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 RHEBQ15382 184 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 NPY5RQ15761 445 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 POU2AF1Q16633 256 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 UGCGQ16739 394 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms