RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TIMM50Q3ZCQ8 353 aa16.5■□□□□ 0.23
SMPD1-208ENST00000533123 HBMQ6B0K9 141 aa16.5■□□□□ 0.23
SMPD1-208ENST00000533123 VASNQ6EMK4 673 aa16.5■□□□□ 0.23
SMPD1-208ENST00000533123 USP43Q70EL4 1123 aa16.5■□□□□ 0.23
SMPD1-208ENST00000533123 UFD1Q92890 307 aa16.5■□□□□ 0.23
SMPD1-208ENST00000533123 ADGRG7Q96K78 797 aa16.5■□□□□ 0.23
SMPD1-208ENST00000533123 CNN2Q99439 309 aaKnown RBP16.5■□□□□ 0.23
SMPD1-208ENST00000533123 STUB1Q9UNE7 303 aa16.5■□□□□ 0.23
SMPD1-208ENST00000533123 ZNF814B7Z6K7 855 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 ACTL6AO96019 429 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 HLA-DOBP13765 273 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 ZNF708P17019 499 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 UGT2B10P36537 528 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 CARD18P57730 90 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 SLC35A1P78382 337 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 TPBGQ13641 420 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 GGTLC2Q14390 218 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 INAQ16352 499 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 ACKR1Q16570 336 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 C3AR1Q16581 482 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 TRIM16LQ309B1 348 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 H1FNTQ75WM6 255 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-208ENST00000533123 TEX19Q8NA77 164 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 OR10D3Q8NH80 312 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 TM9SF2Q99805 663 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 SRXN1Q9BYN0 137 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 SLIRPQ9GZT3 109 aaKnown RBP16.49■□□□□ 0.23
SMPD1-208ENST00000533123 CAB39Q9Y376 341 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-208ENST00000533123 IGHV3-15A0A0B4J1V0 119 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 CLDN25C9JDP6 229 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 ARHGEF9O43307 516 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 OR6A2O95222 327 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 HSF1Q00613 529 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 LGALS3BPQ08380 585 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 CD300CQ08708 224 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 POU4F2Q12837 409 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 DGUOKQ16854 277 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 EMC4Q5J8M3 183 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 LINC01590Q5TEZ4 76 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 TMPRSS11AQ6ZMR5 421 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 ADCK1Q86TW2 530 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 SCAIQ8N9R8 606 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 KBTBD8Q8NFY9 601 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 OR2V1Q8NHB1 315 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 CNTNAP3BQ96NU0 1288 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 ALG12Q9BV10 488 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 MROQ9BYG7 248 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 CNTNAP3Q9BZ76 1288 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 SYT4Q9H2B2 425 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 CHST11Q9NPF2 352 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 ISYNA1Q9NPH2 558 aa16.49■□□□□ 0.23
SMPD1-208ENST00000533123 SF3B6Q9Y3B4 125 aaKnown RBP16.49■□□□□ 0.23
SMPD1-208ENST00000533123 MS4A18H0YCH9 400 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 MAGEB4O15481 346 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-208ENST00000533123 CXCL13O43927 109 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 CRYABP02511 175 aaKnown RBP16.48■□□□□ 0.23
SMPD1-208ENST00000533123 SLC25A1P53007 311 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 CSNK2A1P68400 391 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-208ENST00000533123 ZNF846Q147U1 533 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 MS4A18Q3C1V0 323 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 LCN1P1Q5VSP4 162 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 GPR139Q6DWJ6 353 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 PM20D2Q8IYS1 436 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 CISD2Q8N5K1 135 aaKnown RBP16.48■□□□□ 0.23
SMPD1-208ENST00000533123 ZNF511Q8NB15 262 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 ZNF845Q96IR2 970 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-208ENST00000533123 SLC25A18Q9H1K4 315 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 SRA1Q9HD15 236 aaKnown RBP16.48■□□□□ 0.23
SMPD1-208ENST00000533123 INPP5EQ9NRR6 644 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 B3GALT5Q9Y2C3 310 aa16.48■□□□□ 0.23
SMPD1-208ENST00000533123 SIRT4Q9Y6E7 314 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-208ENST00000533123 AKAP8O43823 692 aaKnown RBP16.47■□□□□ 0.23
SMPD1-208ENST00000533123 RAMP1O60894 148 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 GLCEO94923 617 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 CELP19835 753 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 ENPP1P22413 925 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 ACVR1BP36896 505 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 RAC3P60763 192 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 PUDPQ08623 228 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 MELKQ14680 651 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 SLC35D3Q5M8T2 416 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 SLC35F2Q8IXU6 374 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 OR6V1Q8N148 313 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 POMGNT2Q8NAT1 580 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 ZNF519Q8TB69 540 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 C4orf36Q96KX1 117 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 UCN2Q96RP3 112 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 E9PI62 339 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 FZD7O75084 574 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 P2RY4P51582 365 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 OR12D2P58182 307 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 RPL27P61353 136 aaKnown RBP16.47■□□□□ 0.23
SMPD1-208ENST00000533123 ACTC1P68032 377 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 ACTA1P68133 377 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 H3F3AP84243 136 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 LY6DQ14210 128 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 FAM180AQ6UWF9 173 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 MEIOBQ8N635 442 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 ARIH2OSQ8N7S6 290 aa16.47■□□□□ 0.23
SMPD1-208ENST00000533123 DCLRE1CQ96SD1 692 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms