RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 MPV17P39210 176 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 RGS8P57771 180 aaPredicted RBP11.04□□□□□ -0.64
COPB1-209ENST00000533096 IL13RA1P78552 427 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 HSF2Q03933 536 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 ZNF718Q3SXZ3 478 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 KRT71Q3SY84 523 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 SPRNQ5BIV9 151 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 FAM91A1Q658Y4 838 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 DOK3Q7L591 496 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 HIST3H2AQ7L7L0 130 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 KRT73Q86Y46 540 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 LRRC17Q8N6Y2 441 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 ANKRD42Q8N9B4 389 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 SYT14Q8NB59 555 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 CPEB3Q8NE35 698 aaKnown RBP11.04□□□□□ -0.64
COPB1-209ENST00000533096 HIPK4Q8NE63 616 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 DEFB108BQ8NET1 73 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 OR9I1Q8NGQ6 314 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 OR6S1Q8NH40 331 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 OR6X1Q8NH79 312 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 GEMIN6Q8WXD5 167 aaKnown RBP11.04□□□□□ -0.64
COPB1-209ENST00000533096 HIST1H2ACQ93077 130 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 SLC25A44Q96H78 314 aaPredicted RBP11.04□□□□□ -0.64
COPB1-209ENST00000533096 ZNF48Q96MX3 618 aaPredicted RBP11.04□□□□□ -0.64
COPB1-209ENST00000533096 EGLN1Q9GZT9 426 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 PLEK2Q9NYT0 353 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 TRPC5OSA6NMA1 111 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 KPNA4O00629 521 aaPredicted RBP11.03□□□□□ -0.64
COPB1-209ENST00000533096 HDAC3O15379 428 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 TPST2O60704 377 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 FZD7O75084 574 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 ENTPD5O75356 428 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 UMPSP11172 480 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 ETS2P15036 469 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 CLRN1P58418 232 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 CDK6Q00534 326 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 SLC3A1Q07837 685 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 ZNF154Q13106 437 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 SLC9A3R2Q15599 337 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 PABPC1L2AQ5JQF8 200 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 KLF17Q5JT82 389 aaPredicted RBP11.03□□□□□ -0.64
COPB1-209ENST00000533096 HHATQ5VTY9 493 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 KIRREL3Q8IZU9 778 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.03□□□□□ -0.64
COPB1-209ENST00000533096 POP5Q969H6 163 aaKnown RBP11.03□□□□□ -0.64
COPB1-209ENST00000533096 MCHR2Q969V1 340 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 C1orf147Q96MC9 270 aaPredicted RBP11.03□□□□□ -0.64
COPB1-209ENST00000533096 MRI1Q9BV20 369 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 SPATA5L1Q9BVQ7 753 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 PAIP1Q9H074 479 aaKnown RBP11.03□□□□□ -0.64
COPB1-209ENST00000533096 KCNN2Q9H2S1 579 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 RAD21L1Q9H4I0 556 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 MSL2Q9HCI7 577 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 NPHS2Q9NP85 383 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 DCAF16Q9NXF7 216 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 TAS2R5Q9NYW4 299 aa11.03□□□□□ -0.64
COPB1-209ENST00000533096 PURGQ9UJV8 347 aaKnown RBP11.03□□□□□ -0.64
COPB1-209ENST00000533096 A0A0B4J2E0 115 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 A0A0G2JK05 382 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 A0A1B0GX12 115 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 C5orf49A4QMS7 147 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 ZSCAN5BA6NJL1 495 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 BLOC1S5-TXNDC5H3BN57 136 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 UBOX5O94941 541 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 STOMP27105 288 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 ZNF84P51523 738 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 SGCAQ16586 387 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 GCNT6Q5T4J0 391 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 REEP3Q6NUK4 255 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 DHRS4L2Q6PKH6 230 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 SPATC1Q76KD6 591 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 SMYD1Q8NB12 490 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 OR52E2Q8NGJ4 325 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 AKR7LQ8NHP1 331 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 SLC25A40Q8TBP6 338 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 GTF2H4Q92759 462 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 TMIGD2Q96BF3 282 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 ZNF347Q96SE7 839 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 CCT8L2Q96SF2 557 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 MCHR1Q99705 422 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 OR2J1Q9GZK6 312 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 C1orf198Q9H425 327 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 CCNB1IP1Q9NPC3 277 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 HAO1Q9UJM8 370 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 TRIM33Q9UPN9 1127 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 NPTNQ9Y639 398 aa11.02□□□□□ -0.65
COPB1-209ENST00000533096 PRORSD1PA6NEY8 169 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 CPSF4LA6NMK7 179 aaKnown RBP11.01□□□□□ -0.65
COPB1-209ENST00000533096 M0R3H8 397 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 UBDO15205 165 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 TM9SF1O15321 606 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 SERPINB7O75635 380 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 SNAP29O95721 258 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 MT-ATP6P00846 226 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 CDAP32320 146 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 GDI2P50395 445 aaKnown RBP11.01□□□□□ -0.65
COPB1-209ENST00000533096 MMP15P51511 669 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 SEC61A1P61619 476 aaKnown RBP11.01□□□□□ -0.65
COPB1-209ENST00000533096 VSNL1P62760 191 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 TNFAIP6P98066 277 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms