RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ARF1P84077 181 aaKnown RBP12.67□□□□□ -0.38
CPSF1-206ENST00000531480 TOP3AQ13472 1001 aaPredicted RBP12.67□□□□□ -0.38
CPSF1-206ENST00000531480 KRR1Q13601 381 aaKnown RBP12.67□□□□□ -0.38
CPSF1-206ENST00000531480 TBRG1Q3YBR2 411 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 ZNF362Q5T0B9 420 aaPredicted RBP12.67□□□□□ -0.38
CPSF1-206ENST00000531480 SLC25A47Q6Q0C1 308 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 FOXL2NBQ6ZUU3 175 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 PARP8Q8N3A8 854 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 LNX2Q8N448 690 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 ZNF570Q96NI8 536 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 ZNF184Q99676 751 aaPredicted RBP12.67□□□□□ -0.38
CPSF1-206ENST00000531480 FOXB1Q99853 325 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 IER3IP1Q9Y5U9 82 aa12.67□□□□□ -0.38
CPSF1-206ENST00000531480 IGKV1D-43A0A0B4J1Z2 117 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 SLC22A23A1A5C7 686 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 PRSS37A4D1T9 235 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 A6NNC1 897 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 PPP1R3DO95685 299 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 DAPP51397 102 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 PPA1Q15181 289 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 C9orf135Q5VTT2 229 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 KDM4DQ6B0I6 523 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 PTCHD4Q6ZW05 846 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 CCDC36Q8IYA8 594 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 FAM169BQ8N8A8 192 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 SYT14Q8NB59 555 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 OR52L1Q8NGH7 329 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 RASD2Q96D21 266 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 DDOQ99489 341 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 SEMA6AQ9H2E6 1030 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 TMEM38BQ9NVV0 291 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 KIF17Q9P2E2 1029 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 BAIAP2Q9UQB8 552 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 AMDHD2Q9Y303 409 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 UGT2A1Q9Y4X1 527 aa12.66□□□□□ -0.38
CPSF1-206ENST00000531480 TEX15Q9BXT5 2789 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 XKRYO14609 159 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 ARHGEF9O43307 516 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 CTAG2O75638 210 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 HRGP04196 525 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 IGFBP1P08833 259 aaPredicted RBP12.65□□□□□ -0.38
CPSF1-206ENST00000531480 OSMP13725 252 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 SSTR2P30874 369 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 CDKN2AP42771 156 aaKnown RBP12.65□□□□□ -0.38
CPSF1-206ENST00000531480 MRPS34P82930 218 aaKnown RBP12.65□□□□□ -0.38
CPSF1-206ENST00000531480 PPP2R2BQ00005 443 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 FMODQ06828 376 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 C3orf36Q3SXR2 165 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 SLC36A3Q495N2 470 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 HIKESHIQ53FT3 197 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 NABP1Q96AH0 204 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 ERMAPQ96PL5 475 aaPredicted RBP12.65□□□□□ -0.38
CPSF1-206ENST00000531480 RBP7Q96R05 134 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 IFT27Q9BW83 186 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 MOV10Q9HCE1 1003 aaKnown RBP12.65□□□□□ -0.38
CPSF1-206ENST00000531480 B3GNT2Q9NY97 397 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 ZNF224Q9NZL3 707 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 CRNNQ9UBG3 495 aaPredicted RBP12.65□□□□□ -0.38
CPSF1-206ENST00000531480 TMEFF2Q9UIK5 374 aaPredicted RBP12.65□□□□□ -0.38
CPSF1-206ENST00000531480 OAZ3Q9UMX2 235 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 POFUT2Q9Y2G5 429 aa12.65□□□□□ -0.38
CPSF1-206ENST00000531480 ABCA12Q86UK0 2595 aa12.65□□□□□ -0.39
CPSF1-206ENST00000531480 RAI1Q7Z5J4 1906 aaPredicted RBP12.64□□□□□ -0.39
CPSF1-206ENST00000531480 SOCS2O14508 198 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 SOX14O95416 240 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 SLC2A10O95528 541 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 PRF1P14222 555 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 HIST1H1CP16403 213 aaKnown RBP12.64□□□□□ -0.39
CPSF1-206ENST00000531480 ALDH3A2P51648 485 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 CDK5Q00535 292 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 CD47Q08722 323 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 CLEC12AQ5QGZ9 265 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 ATG16L2Q8NAA4 619 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 NPEPL1Q8NDH3 523 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 OR2T33Q8NG76 320 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 OR4Q3Q8NH05 313 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 MUCL1Q96DR8 90 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 ZNF75AQ96N20 296 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 TMEM204Q9BSN7 226 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 TSSK6Q9BXA6 273 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 TEX12Q9BXU0 123 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 PAPOLBQ9NRJ5 636 aaKnown RBP12.64□□□□□ -0.39
CPSF1-206ENST00000531480 RASSF1Q9NS23 344 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 TBC1D23Q9NUY8 699 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 NPAP1Q9NZP6 1156 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 RAB26Q9ULW5 256 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 LRBAP50851 2863 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 CADP27708 2225 aa12.64□□□□□ -0.39
CPSF1-206ENST00000531480 ZNF503-AS2A6NEH8 195 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 H7C1C5 153 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 CASKO14936 926 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 WNT11O96014 354 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 IGKV3-15P01624 115 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 CTLA4P16410 223 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 GRK5P34947 590 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 GIPRP48546 466 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 ZNF84P51523 738 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms