RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LYARQ9NX58 379 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 VNN3Q9NY84 501 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ZNF282Q9UDV7 671 aaPredicted RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SCML1Q9UN30 329 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ACOT9Q9Y305 439 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 DHRS7Q9Y394 339 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 ZNF337Q9Y3M9 751 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 TBL2Q9Y4P3 447 aaKnown RBP2.77□□□□□ -1.97
PTPRK-220ENST00000531466 MMACHCQ9Y4U1 282 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 HEY1Q9Y5J3 304 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 NUBP2Q9Y5Y2 271 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 USH1CQ9Y6N9 552 aa2.77□□□□□ -1.97
PTPRK-220ENST00000531466 SOGA1O94964 1423 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 PPIAL4EA0A075B759 164 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TRAV9-2A0A087WT02 112 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 METTL15A6NJ78 407 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 ZNF487B1APH4 448 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 H3BNH8 94 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SMLR1H3BR10 107 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TXNDC9O14530 226 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TNFSF11O14788 317 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 PFDN6O15212 129 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TM9SF1O15321 606 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 INPP4BO15327 924 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SLC16A4O15374 487 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CFLARO15519 480 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 AQP9O43315 295 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TIMM8AO60220 97 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 FADS1O60427 444 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 UGT1A9O60656 530 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TOM1O60784 492 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 HUS1O60921 280 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CPNE6O95741 557 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 LDOC1O95751 146 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TSPAN12O95859 305 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 IFNA5P01569 189 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 PPBPP02775 128 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CRHP06850 196 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 PPIAL4FP0DN26 164 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 UCHL3P15374 230 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 NQO1P15559 274 aaKnown RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CD1EP15812 388 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TCP1P17987 556 aaKnown RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 PGAM1P18669 254 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CXCR2P25025 360 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SSTR1P30872 391 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CDH5P33151 784 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 KDELR2P33947 212 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 EPHX2P34913 555 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SFTPDP35247 375 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 ARR3P36575 388 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 HSPA9P38646 679 aaKnown RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 PTGFRP43088 359 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 OR3A1P47881 315 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 UQCRFS1P47985 274 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 NPBWR2P48146 333 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 RAB13P51153 203 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 NKX2-5P52952 324 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 MLF1P58340 268 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 PSME3P61289 254 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 ESRRGP62508 458 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 ERVK-25P63136 954 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 BST2Q10589 180 aaKnown RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 BAMBIQ13145 260 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SLC39A6Q13433 755 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CRMP1Q14194 572 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TRIP10Q15642 601 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 EXOC3L4Q17RC7 722 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 MICBQ29980 383 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 DCAF4L1Q3SXM0 396 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 C9orf135Q5VTT2 229 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 FAM46CQ5VWP2 391 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 FRMPD2BQ6IN97 320 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 RPL13AP3Q6NVV1 102 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 HSDL2Q6YN16 418 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CENPUQ71F23 418 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 DPY19L4Q7Z388 723 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TMED4Q7Z7H5 227 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SLC22A16Q86VW1 577 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 MFSD6LQ8IWD5 586 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 AQP12AQ8IXF9 295 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 ZFP82Q8N141 532 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 RIBC1Q8N443 379 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 ZNF561Q8N587 486 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SYT14Q8NB59 555 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 OR9G4Q8NGQ1 327 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 OR51A7Q8NH64 312 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 OR6X1Q8NH79 312 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 GRPEL2Q8TAA5 225 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 ACTL9Q8TC94 416 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 RAET1EQ8TD07 263 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SPRYD4Q8WW59 207 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 ACOT11Q8WXI4 607 aaPredicted RBP2.76□□□□□ -1.97
PTPRK-220ENST00000531466 SMPDL3AQ92484 453 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 OSTF1Q92882 214 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CDS1Q92903 461 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 GLYATL1Q969I3 302 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 TAMM41Q96BW9 452 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 CASD1Q96PB1 797 aa2.76□□□□□ -1.97
PTPRK-220ENST00000531466 XPO6Q96QU8 1125 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms