RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 ZNF724A8MTY0 619 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 PTGES3LE9PB15 166 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 PRODHO43272 600 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 SELENOFO60613 162 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 MPZL1O95297 269 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 IL2RAP01589 272 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 SLC2A5P22732 501 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 GSTT1P30711 240 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 CDH15P55291 814 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 EIF2S3LQ2VIR3 472 aaKnown RBP9.41□□□□□ -0.9
SOX6-213ENST00000530378 NXNL2Q5VZ03 156 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 LRFN4Q6PJG9 635 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 AHSA2Q719I0 299 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 FAM214BQ7L5A3 538 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 FJX1Q86VR8 437 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 GPR137CQ8N3F9 429 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 OR51G2Q8NGK0 314 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 FBLIM1Q8WUP2 373 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 TRUB1Q8WWH5 349 aaKnown RBP9.41□□□□□ -0.9
SOX6-213ENST00000530378 KISS1RQ969F8 398 aaPredicted RBP9.41□□□□□ -0.9
SOX6-213ENST00000530378 MCHR2Q969V1 340 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 TMEM45BQ96B21 275 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 RNFT2Q96EX2 444 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 TBX5Q99593 518 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 ALG12Q9BV10 488 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 RBM24Q9BX46 236 aaKnown RBP9.41□□□□□ -0.9
SOX6-213ENST00000530378 NMNAT2Q9BZQ4 307 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 OPN3Q9H1Y3 402 aaPredicted RBP9.41□□□□□ -0.9
SOX6-213ENST00000530378 SEC61A2Q9H9S3 476 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 CRLF2Q9HC73 371 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 SLC7A10Q9NS82 523 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 GLTPQ9NZD2 209 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 FOXD3Q9UJU5 478 aaPredicted RBP9.41□□□□□ -0.9
SOX6-213ENST00000530378 B9D1Q9UPM9 204 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 RCE1Q9Y256 329 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 EMC9Q9Y3B6 208 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 FLNCQ14315 2725 aa9.41□□□□□ -0.9
SOX6-213ENST00000530378 HELZ2Q9BYK8 2649 aaKnown RBP9.41□□□□□ -0.9
SOX6-213ENST00000530378 NCOA6Q14686 2063 aaPredicted RBP9.41□□□□□ -0.9
SOX6-213ENST00000530378 IGLV1-36A0A0B4J1U3 117 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 A0A0G2JNJ9 132 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 C1QL1O75973 258 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 ADRA2AP08913 450 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 DBTP11182 482 aaKnown RBP9.4□□□□□ -0.9
SOX6-213ENST00000530378 BMP5P22003 454 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 GNLYP22749 145 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 PTGER4P35408 488 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 KIR2DL2P43627 348 aaPredicted RBP9.4□□□□□ -0.9
SOX6-213ENST00000530378 HCCSP53701 268 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 FAPQ12884 760 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 SF3B4Q15427 424 aaKnown RBP eCLIP9.4□□□□□ -0.9
SOX6-213ENST00000530378 OCLNQ16625 522 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 OR2A2Q6IF42 318 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 MEPCEQ7L2J0 689 aaKnown RBP9.4□□□□□ -0.9
SOX6-213ENST00000530378 BTLAQ7Z6A9 289 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 ERI1Q8IV48 349 aaKnown RBP9.4□□□□□ -0.9
SOX6-213ENST00000530378 GID4Q8IVV7 300 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 C20orf196Q8IYI0 205 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 OR4F15Q8NGB8 312 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 OR2T4Q8NH00 348 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 TMEM54Q969K7 222 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 NMD3Q96D46 503 aaKnown RBP9.4□□□□□ -0.9
SOX6-213ENST00000530378 RBP7Q96R05 134 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 EMC7Q9NPA0 242 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 PAK1IP1Q9NWT1 392 aaPredicted RBP9.4□□□□□ -0.9
SOX6-213ENST00000530378 TAS2R16Q9NYV7 291 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 Q9UFV3 132 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 PRR14LQ5THK1 2151 aa9.4□□□□□ -0.9
SOX6-213ENST00000530378 CYSRT1A8MQ03 144 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 CCL21O00585 134 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 TNFSF13O75888 250 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 SCG5P05408 212 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 PSKH1P11801 424 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 EEF1B2P24534 225 aaKnown RBP9.4□□□□□ -0.91
SOX6-213ENST00000530378 ATP6V1E1P36543 226 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 CHN2P52757 468 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 CASP6P55212 293 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 ROR2Q01974 943 aaKnown RBP9.4□□□□□ -0.91
SOX6-213ENST00000530378 MVKQ03426 396 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 GUSBP1Q15486 140 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 CEACAM16Q2WEN9 425 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 LINC01590Q5TEZ4 76 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 ZNF843Q8N446 348 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 RFLNBQ8N5W9 214 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 ZNF540Q8NDQ6 660 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 PRR7Q8TB68 274 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 Q96MT0 163 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 TEAD3Q99594 435 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 WDR76Q9H967 626 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 PARPBPQ9NWS1 579 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 UPB1Q9UBR1 384 aa9.4□□□□□ -0.91
SOX6-213ENST00000530378 SPTBN1Q01082 2364 aaKnown RBP9.39□□□□□ -0.91
SOX6-213ENST00000530378 EEF1E1-BLOC1S5C9J1V9 151 aa9.39□□□□□ -0.91
SOX6-213ENST00000530378 EEF1E1O43324 174 aaKnown RBP9.39□□□□□ -0.91
SOX6-213ENST00000530378 KHDRBS3O75525 346 aaKnown RBP9.39□□□□□ -0.91
SOX6-213ENST00000530378 GLCEO94923 617 aa9.39□□□□□ -0.91
SOX6-213ENST00000530378 B4GALT1P15291 398 aa9.39□□□□□ -0.91
SOX6-213ENST00000530378 HTR1FP30939 366 aa9.39□□□□□ -0.91
SOX6-213ENST00000530378 CA7P43166 264 aa9.39□□□□□ -0.91
SOX6-213ENST00000530378 OR3A2P47893 321 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms