RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 IFNEQ86WN2 208 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 ZNF440Q8IYI8 595 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 KRTCAP2Q8N6L1 136 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 COX18Q8N8Q8 333 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 FAM83FQ8NEG4 500 aaPredicted RBP3.45□□□□□ -1.86
C11orf54-208ENST00000530279 OR2M3Q8NG83 312 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 OR4K17Q8NGC6 315 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 OR4C3Q8NH37 302 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 CDC26Q8NHZ8 85 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 THAP6Q8TBB0 222 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 AGR3Q8TD06 166 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 DYDC1Q8WWB3 177 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 TMEM234Q8WY98 164 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 ST8SIA1Q92185 356 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 ABTB1Q969K4 478 aaPredicted RBP3.45□□□□□ -1.86
C11orf54-208ENST00000530279 TAAR8Q969N4 342 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 CIDECQ96AQ7 238 aaPredicted RBP3.45□□□□□ -1.86
C11orf54-208ENST00000530279 RMND5BQ96G75 393 aaPredicted RBP3.45□□□□□ -1.86
C11orf54-208ENST00000530279 OR52E6Q96RD3 313 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 PANX1Q96RD7 426 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 NODALQ96S42 347 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 CDRT15Q96T59 188 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 SDF2Q99470 211 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 SEPHS2Q99611 448 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 TTYH2Q9BSA4 534 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 C1orf50Q9BV19 199 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 ZNF350Q9GZX5 532 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 ARMC7Q9H6L4 198 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 MTHFD2LQ9H903 347 aaPredicted RBP3.45□□□□□ -1.86
C11orf54-208ENST00000530279 BCL2L10Q9HD36 194 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 KCNJ16Q9NPI9 418 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 EXOSC3Q9NQT5 275 aaKnown RBP3.45□□□□□ -1.86
C11orf54-208ENST00000530279 SLC35A3Q9Y2D2 325 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 AP3M1Q9Y2T2 418 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 NOTCH3Q9UM47 2321 aa3.45□□□□□ -1.86
C11orf54-208ENST00000530279 PLCE1Q9P212 2302 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ARID1AO14497 2285 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 A0A096LPI6 279 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 C15orf38-AP3S2A0A0A6YYH1 394 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 IGLV5-39A0A0G2JS06 123 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 RNF103-CHMP3A0A140T963 221 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 A0A1W2PP18 115 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 RPS10-NUDT3A0A1W2PQS6 291 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 FAM166BA8MTA8 275 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 PRSS44E7EML9 344 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 NPIPA2E9PIF3 369 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 NPIPA3F8WFD2 350 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 KIAA0513O60268 411 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 CDC40O60508 579 aaKnown RBP eCLIP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ZG16O60844 167 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 DIAPH2O60879 1101 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 TRAPPC6AO75865 159 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 NDUFB8O95169 186 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 RCBTB2O95199 551 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 OXSR1O95747 527 aaPredicted RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ANGPTL1O95841 491 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 VIMP08670 466 aaKnown RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 TROVE2P10155 538 aaKnown RBP eCLIP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ACP2P11117 423 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ETS2P15036 469 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ZNF708P17019 499 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 RPS4Y1P22090 263 aaKnown RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ME2P23368 584 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 BDKRB2P30411 391 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 SSTR2P30874 369 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 HOXD3P31249 432 aaPredicted RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 CHI3L1P36222 383 aaPredicted RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 KHKP50053 298 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 LHX2P50458 406 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 P2RX1P51575 399 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 POLR2JP52435 117 aaKnown RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 NUDT6P53370 316 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 CLDN18P56856 261 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 B3GALT5-AS1P59052 145 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 SNRPEP62304 92 aaKnown RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ROR2Q01974 943 aaKnown RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 CAMK2DQ13557 499 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 SQLEQ14534 574 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 TWIST1Q15672 202 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ACSF3Q4G176 576 aaPredicted RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 KRBOX4Q5JUW0 171 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 DCST2Q5T1A1 773 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 PDSS1Q5T2R2 415 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 OR4F3Q6IEY1 312 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 RBPMS2Q6ZRY4 209 aaKnown RBP3.44□□□□□ -1.86
C11orf54-208ENST00000530279 CHMP1BQ7LBR1 199 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 C16orf62Q7Z3J2 963 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 FJX1Q86VR8 437 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 GRAMD2AQ8IUY3 354 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 SLC30A8Q8IWU4 369 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 PEX5LQ8IYB4 626 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 SLC43A2Q8N370 569 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 FAM71CQ8NEG0 241 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 OR4A15Q8NGL6 344 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 OR5W2Q8NH69 310 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 CLHC1Q8NHS4 586 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 MGARPQ8TDB4 240 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 ZFP90Q8TF47 636 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 CA5BP1Q8WTZ4 195 aa3.44□□□□□ -1.86
C11orf54-208ENST00000530279 GTF2H4Q92759 462 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms