RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SSX6Q7RTT6 188 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 ZBTB46Q86UZ6 589 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 ATCAYQ86WG3 371 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 UBQLNLQ8IYU4 475 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 RFLNBQ8N5W9 214 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 OR2T27Q8NH04 317 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 CPT1CQ8TCG5 803 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 KCNK17Q96T54 332 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 SPENQ96T58 3664 aaKnown RBP12.82□□□□□ -0.36
TTC39A-216ENST00000530004 TIMP4Q99727 224 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 NAA11Q9BSU3 229 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-216ENST00000530004 EMC6Q9BV81 110 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 OR51E2Q9H255 320 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 ISYNA1Q9NPH2 558 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 B9D1Q9UPM9 204 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 RASD1Q9Y272 281 aa12.82□□□□□ -0.36
TTC39A-216ENST00000530004 IGLV1-36A0A0B4J1U3 117 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 PNMA8CA0A1B0GUJ8 204 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 LOC102725191A0A1B0GVB3 256 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 TVP23AA6NH52 213 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 TRAF3IP2O43734 574 aaPredicted RBP12.81□□□□□ -0.36
TTC39A-216ENST00000530004 GPANK1O95872 356 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 LALBAP00709 142 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 CTLA4P16410 223 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 CPEP16870 476 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF43P17038 809 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 LHX2P50458 406 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 VBP1P61758 197 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 SPCS2Q15005 226 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 HBMQ6B0K9 141 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 ESPNLQ6ZVH7 1005 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 KLBQ86Z14 1044 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 PIAS4Q8N2W9 510 aaPredicted RBP12.81□□□□□ -0.36
TTC39A-216ENST00000530004 UFD1Q92890 307 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 ZHX1-C8orf76Q96EF9 292 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 UCN2Q96RP3 112 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 SRXN1Q9BYN0 137 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 TTTY10Q9BZA0 68 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 KLHL13Q9P2N7 655 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 MED12Q93074 2177 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 LOC100506127A0A0U1RQW1 187 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 SLC22A1O15245 554 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 DNPH1O43598 174 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF708P17019 499 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 CRABP1P29762 137 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 CENPAP49450 140 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 AGFG1P52594 562 aaKnown RBP12.81□□□□□ -0.36
TTC39A-216ENST00000530004 SUCLG1P53597 346 aaKnown RBP12.81□□□□□ -0.36
TTC39A-216ENST00000530004 CLDN18P56856 261 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 CARD18P57730 90 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 RAC3P60763 192 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 NCS1P62166 190 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 ACSM1Q08AH1 577 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 ETFDHQ16134 617 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 BCL2A1Q16548 175 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 PHC2Q8IXK0 858 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 TIGD4Q8IY51 512 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 ZFP41Q8N8Y5 198 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 OR2V1Q8NHB1 315 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 SARAFQ96BY9 339 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 C4orf36Q96KX1 117 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 FOXN4Q96NZ1 517 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 CHCHD6Q9BRQ6 235 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 NDUFB11Q9NX14 153 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 COPS3Q9UNS2 423 aa12.81□□□□□ -0.36
TTC39A-216ENST00000530004 OR14I1A6ND48 311 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 J3QLW9 94 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 ZNHIT1O43257 154 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 AKAP8O43823 692 aaKnown RBP12.8□□□□□ -0.36
TTC39A-216ENST00000530004 VAMP5O95183 116 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 MT-ND5P03915 603 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF19P17023 458 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF182P17025 639 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-216ENST00000530004 EIF1AXP47813 144 aaKnown RBP12.8□□□□□ -0.36
TTC39A-216ENST00000530004 CLDN15P56746 228 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 RPS3AP61247 264 aaKnown RBP12.8□□□□□ -0.36
TTC39A-216ENST00000530004 FMODQ06828 376 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 TPBGQ13641 420 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 TIMM50Q3ZCQ8 353 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 DNM1P34Q6PK57 102 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 FGD2Q7Z6J4 655 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 OR10D3Q8NH80 312 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 NDNFQ8TB73 568 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 ADGRG7Q96K78 797 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 CXorf56Q9H5V9 222 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 BABAM2Q9NXR7 383 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 FREM3P0C091 2139 aa12.8□□□□□ -0.36
TTC39A-216ENST00000530004 SLC35F4A4IF30 521 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 NPIPA2E9PIF3 369 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 NPIPA3F8WFD2 350 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 SMAD9O15198 467 aaKnown RBP12.79□□□□□ -0.36
TTC39A-216ENST00000530004 AHCYL1O43865 530 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 CXCL13O43927 109 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 IGHG1P01857 330 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 HLA-DQA2P01906 255 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 EDN3P14138 238 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 CPN1P15169 458 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 ENPP1P22413 925 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 PSMA1P25786 263 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms