RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CALM1P0DP23 149 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 CALM2P0DP24 149 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 CALM3P0DP25 149 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 ZNF823P16415 610 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 M6PRP20645 277 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 EVI2BP34910 448 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 OPRD1P41143 372 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 ACTA1P68133 377 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 MRPS25P82663 173 aaKnown RBP2.7□□□□□ -1.98
CTR9-204ENST00000529355 DNAJC3Q13217 504 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 COTL1Q14019 142 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 CASP8Q14790 479 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 SGCAQ16586 387 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 RFX4Q33E94 735 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 LINC00173Q6ZV60 143 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 ST13P4Q8IZP2 240 aaPredicted RBP2.7□□□□□ -1.98
CTR9-204ENST00000529355 ZADH2Q8N4Q0 377 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 RLN3Q8WXF3 142 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 OPTNQ96CV9 577 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 TUBGCP3Q96CW5 907 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 CXorf40BQ96DE9 158 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 C19orf60Q96EN9 201 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 MSANTD3Q96H12 275 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 COQ2Q96H96 371 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 FAM210BQ96KR6 192 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 FAIM2Q9BWQ8 316 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 AZI2Q9H6S1 392 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 LRRC19Q9H756 370 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 UGT1A7Q9HAW7 530 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 UGT1A10Q9HAW8 530 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 UGT1A8Q9HAW9 530 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 NTN4Q9HB63 628 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 C8orf4Q9NR00 106 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 COX16Q9P0S2 106 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 ADAM28Q9UKQ2 775 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 KIAA1257Q9ULG3 409 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 VANGL2Q9ULK5 521 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 KIF15Q9NS87 1388 aa2.7□□□□□ -1.98
CTR9-204ENST00000529355 BAZ1AQ9NRL2 1556 aaPredicted RBP2.7□□□□□ -1.98
CTR9-204ENST00000529355 CASZ1Q86V15 1759 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 PTCH1Q13635 1447 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 PLAC8L1A1L4L8 177 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 OR5B21A6NL26 309 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 SNTNA6NMZ2 147 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 SYCE1LA8MT33 242 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 C12orf71A8MTZ7 269 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 MAGEB3O15480 346 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 TOM1O60784 492 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 PFDN1O60925 122 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 HMGN1P05114 100 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 RETP07949 1114 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 POLR2MP0CAP2 368 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 HSMCR30P0CW71 290 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 ADRB3P13945 408 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 CTRB1P17538 263 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 EIF2S2P20042 333 aaKnown RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 PRKACBP22694 351 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 CFL1P23528 166 aaKnown RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 GRIA1P42261 906 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 CCT3P49368 545 aaKnown RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 GDI2P50395 445 aaKnown RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 CRYBB1P53674 252 aaPredicted RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 HADHBP55084 474 aaKnown RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 PFN3P60673 137 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 UBE2IP63279 158 aaKnown RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 TNFRSF17Q02223 184 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 ITGB3BPQ13352 177 aaPredicted RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 EIF4EBP1Q13541 118 aaPredicted RBP2.69□□□□□ -1.98
CTR9-204ENST00000529355 CUL2Q13617 745 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 DOC2AQ14183 400 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 NCF4Q15080 339 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 MOGQ16653 247 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 RGS21Q2M5E4 152 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 DEFB116Q30KQ4 102 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 PDPK2PQ6A1A2 396 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 FAM173BQ6P4H8 233 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 ERICH5Q6P6B1 374 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 CNIH2Q6PI25 160 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 Q6ZR03 302 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 RGS9BPQ6ZS82 235 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 AKAP14Q86UN6 197 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 SLC51BQ86UW2 128 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 ZNF695Q8IW36 515 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 ARHGAP18Q8N392 663 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 Q8N976 141 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 STEAP2Q8NFT2 490 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 OR52M1Q8NGK5 317 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 LILRB4Q8NHJ6 448 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 C10orf35Q96D05 121 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 ASB9Q96DX5 294 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 CCDC42Q96M95 316 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 TAAR1Q96RJ0 339 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 TMEM43Q9BTV4 400 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 CRLF2Q9HC73 371 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 TM9SF3Q9HD45 589 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 IL26Q9NPH9 171 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 ZNF226Q9NYT6 803 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 XCL2Q9UBD3 114 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 CD300AQ9UGN4 299 aa2.69□□□□□ -1.98
CTR9-204ENST00000529355 FADS3Q9Y5Q0 445 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms