RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 OR6B1O95007 311 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 NXPH2O95156 264 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 STATHP02808 62 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 P04436 131 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 SERPIND1P05546 499 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 CD1DP15813 335 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 HIST1H1TP22492 207 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 ATP5A1P25705 553 aaKnown RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 IER3P46695 156 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TAS2R39P59534 338 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 DR1Q01658 176 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 FOLH1Q04609 750 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 STX4Q12846 297 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 DOC2AQ14183 400 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TSNQ15631 228 aaKnown RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 ZKSCAN8Q15776 578 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 NHSL2Q5HYW2 709 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 WLSQ5T9L3 541 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 LIPJQ5W064 366 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 RTL6Q6ICC9 239 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 RAB12Q6IQ22 244 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 FRRS1Q6ZNA5 592 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 FRA10AC1Q70Z53 315 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 LRRC70Q7Z2Q7 622 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 PIWIL3Q7Z3Z3 882 aaKnown RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 COX8CQ7Z4L0 72 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 SLC35F6Q8N357 371 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 LRRC25Q8N386 305 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 FBXW8Q8N3Y1 598 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 ZCCHC7Q8N3Z6 543 aaKnown RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TMEM251Q8N6I4 163 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 NHLRC2Q8NBF2 726 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 C17orf47Q8NEP4 570 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 OR6S1Q8NH40 331 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 RHEBL1Q8TAI7 183 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 STAG3L4Q8TBR4 150 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 ANKRD49Q8WVL7 239 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 PTP4A1Q93096 173 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 ANKRD9Q96BM1 317 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 CMTM7Q96FZ5 175 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 RBM18Q96H35 190 aaKnown RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF486Q96H40 463 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TSNARE1Q96NA8 513 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TSSK2Q96PF2 358 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 GPR22Q99680 433 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 MCRIP2Q9BUT9 160 aaKnown RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 MS4A8Q9BY19 250 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TTTY12Q9BZ98 90 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 DDX47Q9H0S4 455 aaKnown RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 MTHFD2LQ9H903 347 aaPredicted RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 MED20Q9H944 212 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 PNO1Q9NRX1 252 aaKnown RBP3.9□□□□□ -1.79
CSDE1-212ENST00000529046 DNAJC11Q9NVH1 559 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 IKZF3Q9UKT9 509 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 LIPT1Q9Y234 373 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 ATG4BQ9Y4P1 393 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 WIPI2Q9Y4P8 454 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 FAM215AQ9Y5M1 114 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 SPACA6W5XKT8 324 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 PKDREJQ9NTG1 2253 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 NF1P21359 2839 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 IGLV7-46A0A075B6I9 117 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 TRGV5A0A0B4J1U4 118 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 IGKV3D-20A0A0C4DH25 116 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 A0A0U1RQK1 487 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF320A2RRD8 509 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 FAM159BA6NKW6 160 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 SYCE1LA8MT33 242 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 A8MUA0 341 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 EPM2AB3EWF7 344 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 NPIPA2E9PIF3 369 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 H0YIV9 168 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 FOXE1O00358 373 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-212ENST00000529046 TLX2O43763 284 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-212ENST00000529046 CYTIPO60759 359 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 TRIM3O75382 744 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-212ENST00000529046 SNX4O95219 450 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 ETHE1O95571 254 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 EPPINO95925 133 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 C1QAP02745 245 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 AADACP22760 399 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 CRABP2P29373 138 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 SPRP35270 261 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-212ENST00000529046 OR3A3P47888 321 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 HNRNPFP52597 415 aaKnown RBP3.89□□□□□ -1.79
CSDE1-212ENST00000529046 PLA2G16P53816 162 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 NUP107P57740 925 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 RAB10P61026 200 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 IRF8Q02556 426 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 NAB1Q13506 487 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 PDK4Q16654 411 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 KHDRBS2Q5VWX1 349 aaKnown RBP3.89□□□□□ -1.79
CSDE1-212ENST00000529046 MED27Q6P2C8 311 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 C3P1Q6ZMU1 363 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 NCCRP1Q6ZVX7 275 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-212ENST00000529046 ST13P4Q8IZP2 240 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-212ENST00000529046 C10orf53Q8N6V4 93 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 ACOT4Q8N9L9 421 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 CCDC63Q8NA47 563 aa3.89□□□□□ -1.79
CSDE1-212ENST00000529046 CHDHQ8NE62 594 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms