RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 UBL3O95164 117 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 PNPP00491 289 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 HLA-HP01893 362 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 TFP02787 698 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 CELA3BP08861 270 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 CD79AP11912 226 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF35P13682 527 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 NPR2P20594 1047 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 NR4A1P22736 598 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 THBS4P35443 961 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 RAB1AP62820 205 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 SELENOWP63302 87 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 NPRL3Q12980 569 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 HIST3H3Q16695 136 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 LRFN4Q6PJG9 635 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 ARPINQ7Z6K5 226 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 DPPA2Q7Z7J5 298 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 MYPOPQ86VE0 399 aaPredicted RBP9.04□□□□□ -0.96
CPSF1-203ENST00000527916 ZCCHC24Q8N2G6 241 aaKnown RBP9.04□□□□□ -0.96
CPSF1-203ENST00000527916 BPIFB2Q8N4F0 458 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF566Q969W8 418 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 LPAR2Q9HBW0 351 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 NOX3Q9HBY0 568 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 MED4Q9NPJ6 270 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 DDX28Q9NUL7 540 aaKnown RBP9.04□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF224Q9NZL3 707 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 CAPN7Q9Y6W3 813 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 ELOVL7A1L3X0 281 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 SH3PXD2BA1X283 911 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 NPIPB13A6NJU9 1138 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 NPIPB4C9JG80 1138 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 DHHO43323 396 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 SEC14L2O76054 403 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 OR7A10O76100 309 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 SERPINA5P05154 406 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 PGA4P0DJD7 388 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 PGA3P0DJD8 388 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 OR8G3PP0DMU2 310 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 SAGP10523 405 aaPredicted RBP9.03□□□□□ -0.96
CPSF1-203ENST00000527916 UMPSP11172 480 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 ANPEPP15144 967 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 FUT1P19526 365 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 GLRXP35754 106 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 GPR6P46095 362 aaPredicted RBP9.03□□□□□ -0.96
CPSF1-203ENST00000527916 CAPZA2P47755 286 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF133P52736 654 aaPredicted RBP9.03□□□□□ -0.96
CPSF1-203ENST00000527916 TAS2R41P59536 307 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 PIGFQ07326 219 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 ST3GAL3Q11203 375 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 PIN1Q13526 163 aaPredicted RBP9.03□□□□□ -0.96
CPSF1-203ENST00000527916 DAG1Q14118 895 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 CYBRD1Q53TN4 286 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 HSP90B2PQ58FF3 399 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 HDDC2Q7Z4H3 204 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 SPATA21Q7Z572 469 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 NANOGNBQ7Z5D8 188 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 NKAIN4Q8IVV8 208 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 MICU2Q8IYU8 434 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 SLC22A24Q8N4F4 322 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 OR2T12Q8NG77 320 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 CLDND2Q8NHS1 167 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 TMEM239Q8WW34 195 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 SEPHS2Q99611 448 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 HOPXQ9BPY8 73 aaPredicted RBP9.03□□□□□ -0.96
CPSF1-203ENST00000527916 MRPL13Q9BYD1 178 aaKnown RBP9.03□□□□□ -0.96
CPSF1-203ENST00000527916 STX18Q9P2W9 335 aaKnown RBP9.03□□□□□ -0.96
CPSF1-203ENST00000527916 MED31Q9Y3C7 131 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 CMAHPQ9Y471 501 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 NBEAL2Q6ZNJ1 2754 aa9.03□□□□□ -0.96
CPSF1-203ENST00000527916 WNK1Q9H4A3 2382 aa9.02□□□□□ -0.96
CPSF1-203ENST00000527916 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 LYNX1G3V0Z9 82 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 BLOC1S5-TXNDC5H3BN57 136 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 KPNA4O00629 521 aaPredicted RBP9.02□□□□□ -0.97
CPSF1-203ENST00000527916 CCDC22O60826 627 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 SERPINI2O75830 405 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 FARS2O95363 451 aaKnown RBP9.02□□□□□ -0.97
CPSF1-203ENST00000527916 RAB36O95755 333 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 IGHG1P01857 330 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 ADRA2AP08913 450 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 QDPRP09417 244 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 LYNX1P0DP58 116 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 HKR1P10072 659 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 GAAP10253 952 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 B4GALT1P15291 398 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 TNFRSF1BP20333 461 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 FPR2P25090 351 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 IFNA8P32881 189 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 MDH1P40925 334 aaKnown RBP9.02□□□□□ -0.97
CPSF1-203ENST00000527916 OR1E2P47887 323 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 PTDSS1P48651 473 aaKnown RBP9.02□□□□□ -0.97
CPSF1-203ENST00000527916 UGT2B15P54855 530 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 RPL18Q07020 188 aaKnown RBP9.02□□□□□ -0.97
CPSF1-203ENST00000527916 FXNQ16595 210 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 SKA3Q8IX90 412 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 TMEM255BQ8WV15 326 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 LZICQ8WZA0 190 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 SGTBQ96EQ0 304 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms