RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PRRC2CQ9Y520 2896 aaKnown RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 A0A087WUJ7 227 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 A0A1B0GW55 424 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ELOA3DA6NLF2 546 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 RAD1O60671 282 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 RDH16O75452 317 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 CDC123O75794 336 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 RLN2P04090 185 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 CD3DP04234 171 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 DUX4L2P0CJ85 424 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 DUX4L3P0CJ86 424 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 DUX4L4P0CJ87 422 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 DUX4L5P0CJ88 424 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 DUX4L6P0CJ89 424 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 DUX4L7P0CJ90 424 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 BCKDHBP21953 392 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 PRSS3P35030 304 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 MAP3K8P41279 467 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 EFNB2P52799 333 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 PRPS1P60891 318 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ELOA3BQ3SY89 546 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 EXOSC6Q5RKV6 272 aaKnown RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 LINC01590Q5TEZ4 76 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 LINC00114Q6XXX2 140 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 HSD17B13Q7Z5P4 300 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 LRRTM1Q86UE6 522 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ELOA3Q8NG57 546 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 OR52H1Q8NGJ2 320 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 TSEN15Q8WW01 171 aaKnown RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 CCDC74AQ96AQ1 378 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 NKX3-1Q99801 234 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 C8orf33Q9H7E9 229 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 DUX4Q9UBX2 424 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 GGT3PA6NGU5 568 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 PRR19A6NJB7 356 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 CENPAP49450 140 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ZP2Q05996 745 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 DENND4AQ7Z401 1863 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF546Q86UE3 836 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 SLC22A18ASQ8N1D0 253 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 CA13Q8N1Q1 262 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 OR51A4Q8NGJ6 313 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF417Q8TAU3 575 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ANKRD9Q96BM1 317 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 NMNAT2Q9BZQ4 307 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 KCNK15Q9H427 330 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 TAS2R3Q9NYW6 316 aa11.35□□□□□ -0.59
CAPN1-208ENST00000527323 ASCC3Q8N3C0 2202 aaKnown RBP11.35□□□□□ -0.59
CAPN1-208ENST00000527323 TMEM127O75204 238 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 UPK3AO75631 287 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 CSNK1EP49674 416 aaKnown RBP11.34□□□□□ -0.59
CAPN1-208ENST00000527323 RGS19P49795 217 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 MECP2P51608 486 aaKnown RBP11.34□□□□□ -0.59
CAPN1-208ENST00000527323 PSMD4P55036 377 aaKnown RBP11.34□□□□□ -0.59
CAPN1-208ENST00000527323 FAM74A1Q5RGS3 127 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 OTPQ5XKR4 325 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 ELP2Q6IA86 826 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 LRFN4Q6PJG9 635 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 CSNK1A1LQ8N752 337 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 LSM14AQ8ND56 463 aaKnown RBP11.34□□□□□ -0.59
CAPN1-208ENST00000527323 RCBTB1Q8NDN9 531 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 PXT1Q8NFP0 134 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 OR10K1Q8NGX5 313 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 OR6N1Q8NGY5 312 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 OR4C3Q8NH37 302 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 GPR148Q8TDV2 347 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 DNAJA3Q96EY1 480 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 ATG5Q9H1Y0 275 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 EVA1AQ9H8M9 152 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 MOKQ9UQ07 419 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 A0A1B0GTQ1 180 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 H3BUI4 141 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 HRKO00198 91 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 IGHV4-34P06331 123 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 ACHEP22303 614 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 CALCRP30988 508 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 MNDAP41218 407 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 POU3F4P49335 361 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 DPY19L4Q7Z388 723 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 CTHRC1Q96CG8 243 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 LMF1Q96S06 567 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 SLC38A3Q99624 504 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 TMEM185BQ9H7F4 350 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 APMAPQ9HDC9 416 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 PRKNO60260 465 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-208ENST00000527323 CTAG2O75638 210 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 SLC35E2P0CK97 266 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 PPP1CAP62136 330 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 GPR18Q14330 331 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 ALG10Q5BKT4 473 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF684Q5T5D7 378 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 ARHGAP40Q5TG30 622 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 ALKBH2Q6NS38 261 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 STEAP1BQ6NZ63 245 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 BEST3Q8N1M1 668 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 BOLLQ8N9W6 283 aaKnown RBP11.34□□□□□ -0.59
CAPN1-208ENST00000527323 OR9A4Q8NGU2 314 aa11.34□□□□□ -0.59
CAPN1-208ENST00000527323 OR2G2Q8NGZ5 317 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms