RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 OR4K5Q8NGD3 323 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 LRMDAQ9H2I8 198 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 TMEM38AQ9H6F2 299 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 SAP30LQ9HAJ7 183 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 DDX28Q9NUL7 540 aaKnown RBP13.7□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF446Q9NWS9 450 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 SLAMF8Q9P0V8 285 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 OPN4Q9UHM6 478 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 PCDHGB1Q9Y5G3 927 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 GMEB1Q9Y692 573 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 CACNG2Q9Y698 323 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 IQCMA0A1B0GVH7 501 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 TMPRSS2O15393 492 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 RNF13O43567 381 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 FMO6PO60774 539 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 SASH3O75995 380 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 PRSS23O95084 383 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 FSHBP01225 129 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 IGHV3-13P01766 116 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 QDPRP09417 244 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 DRD4P21917 467 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 FOXL1Q12952 345 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 TSTQ16762 297 aaKnown RBP13.69□□□□□ -0.22
PTPRU-210ENST00000527027 SHISA2Q6UWI4 295 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 SLC16A14Q7RTX9 510 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 ARMC8Q8IUR7 673 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 ICA1LQ8NDH6 482 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 TLCD1Q96CP7 247 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 MCHR1Q99705 422 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF696Q9H7X3 374 aa13.69□□□□□ -0.22
PTPRU-210ENST00000527027 TRRAPQ9Y4A5 3859 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 TMEM120BA0PK00 339 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 CHP2O43745 196 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 MFN2O95140 757 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 CH25HO95992 272 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 PGA4P0DJD7 388 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 PGA3P0DJD8 388 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 HKR1P10072 659 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 GPX2P18283 190 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 AQP1P29972 269 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 MRPL19P49406 292 aaKnown RBP13.68□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF81P51508 661 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 MAGOHP61326 146 aaKnown RBP13.68□□□□□ -0.22
PTPRU-210ENST00000527027 MELKQ14680 651 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF74Q16587 644 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 NRN1LQ496H8 165 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 FAM209AQ5JX71 171 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 BLOC1S3Q6QNY0 202 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 FUNDC1Q8IVP5 155 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 RBM15BQ8NDT2 890 aaKnown RBP13.68□□□□□ -0.22
PTPRU-210ENST00000527027 HIPK4Q8NE63 616 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 C22orf15Q8WYQ4 148 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 CCL17Q92583 94 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 GTF3AQ92664 365 aaKnown RBP13.68□□□□□ -0.22
PTPRU-210ENST00000527027 DVL3Q92997 716 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-210ENST00000527027 ELMOD3Q96FG2 381 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 GAL3ST1Q99999 423 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 NANSQ9NR45 359 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 VAPAQ9P0L0 249 aa13.68□□□□□ -0.22
PTPRU-210ENST00000527027 EVPLLA8MZ36 301 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 MGRN1O60291 552 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 HIST1H2ABP04908 130 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 APLNRP35414 380 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 STX1BP61266 288 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 GLO1Q04760 184 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 HIST3H3Q16695 136 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 PAGE3Q5JUK9 113 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 TTC33Q6PID6 262 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-210ENST00000527027 RBMS3Q6XE24 437 aaKnown RBP13.67□□□□□ -0.22
PTPRU-210ENST00000527027 HIST3H2AQ7L7L0 130 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 LRRC17Q8N6Y2 441 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 SMYD1Q8NB12 490 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 OR1J1Q8NGS3 322 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 HIST1H2ACQ93077 130 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 MCHR2Q969V1 340 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 IKZF5Q9H5V7 419 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 SLCO1B3Q9NPD5 702 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 NKIRAS1Q9NYS0 192 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF229Q9UJW7 825 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 CORO2BQ9UQ03 480 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 PPIAL4AQ9Y536 164 aa13.67□□□□□ -0.22
PTPRU-210ENST00000527027 PPIAL4EA0A075B759 164 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 TRBV5-3A0A0A0MS03 114 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 PPIAL4CA0A0B4J2A2 164 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 PPIAL4DF5H284 164 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 M0R3H8 397 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 SPRY3O43610 288 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 IGHV1-46P01743 117 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 IGHG1P01857 330 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 MMP7P09237 267 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-210ENST00000527027 PPIAL4FP0DN26 164 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 MAKP20794 623 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF84P51523 738 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 CLRN1P58418 232 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 LCN2P80188 198 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 SLC3A1Q07837 685 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 DUSP7Q16829 419 aa13.66□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF718Q3SXZ3 478 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms