RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 MAB21L1Q13394 359 aa3□□□□□ -1.93
CD44-223ENST00000526553 C1orf100Q5SVJ3 147 aa3□□□□□ -1.93
CD44-223ENST00000526553 CLEC2AQ6UVW9 174 aa3□□□□□ -1.93
CD44-223ENST00000526553 FAM220AQ7Z4H9 259 aa3□□□□□ -1.93
CD44-223ENST00000526553 ZNF546Q86UE3 836 aa3□□□□□ -1.93
CD44-223ENST00000526553 MICU2Q8IYU8 434 aa3□□□□□ -1.93
CD44-223ENST00000526553 ENTHD1Q8IYW4 607 aa3□□□□□ -1.93
CD44-223ENST00000526553 GABRG1Q8N1C3 465 aa3□□□□□ -1.93
CD44-223ENST00000526553 BPIFCQ8NFQ6 507 aa3□□□□□ -1.93
CD44-223ENST00000526553 OR6C4Q8NGE1 309 aa3□□□□□ -1.93
CD44-223ENST00000526553 OR52I1Q8NGK6 324 aa3□□□□□ -1.93
CD44-223ENST00000526553 FGF14Q92915 247 aa3□□□□□ -1.93
CD44-223ENST00000526553 SMARCD2Q92925 531 aa3□□□□□ -1.93
CD44-223ENST00000526553 PEX13Q92968 403 aa3□□□□□ -1.93
CD44-223ENST00000526553 CCDC126Q96EE4 140 aa3□□□□□ -1.93
CD44-223ENST00000526553 SLC35E1Q96K37 410 aa3□□□□□ -1.93
CD44-223ENST00000526553 ATP5SQ99766 215 aa3□□□□□ -1.93
CD44-223ENST00000526553 BPIFA3Q9BQP9 254 aa3□□□□□ -1.93
CD44-223ENST00000526553 PELOQ9BRX2 385 aaKnown RBP3□□□□□ -1.93
CD44-223ENST00000526553 TMEM59Q9BXS4 323 aa3□□□□□ -1.93
CD44-223ENST00000526553 OR51J1Q9H342 316 aa3□□□□□ -1.93
CD44-223ENST00000526553 SLC25A22Q9H936 323 aa3□□□□□ -1.93
CD44-223ENST00000526553 ADAP2Q9NPF8 381 aa3□□□□□ -1.93
CD44-223ENST00000526553 AIG1Q9NVV5 245 aa3□□□□□ -1.93
CD44-223ENST00000526553 LYARQ9NX58 379 aaKnown RBP3□□□□□ -1.93
CD44-223ENST00000526553 VANGL2Q9ULK5 521 aa3□□□□□ -1.93
CD44-223ENST00000526553 MED14O60244 1454 aa3□□□□□ -1.93
CD44-223ENST00000526553 PZPP20742 1482 aa3□□□□□ -1.93
CD44-223ENST00000526553 PLEKHH2Q8IVE3 1493 aa3□□□□□ -1.93
CD44-223ENST00000526553 NLRP1Q9C000 1473 aa3□□□□□ -1.93
CD44-223ENST00000526553 ARHGAP35Q9NRY4 1499 aa3□□□□□ -1.93
CD44-223ENST00000526553 EEA1Q15075 1411 aa3□□□□□ -1.93
CD44-223ENST00000526553 MIA2Q96PC5 1412 aa3□□□□□ -1.93
CD44-223ENST00000526553 JCADQ9P266 1359 aa3□□□□□ -1.93
CD44-223ENST00000526553 GPATCH8Q9UKJ3 1502 aaKnown RBP2.99□□□□□ -1.93
CD44-223ENST00000526553 LRRIQ3A6PVS8 624 aaPredicted RBP2.99□□□□□ -1.93
CD44-223ENST00000526553 C12orf71A8MTZ7 269 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 SIRPB1O00241 398 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 NDUFAB1O14561 156 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 RAB29O14966 203 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 TIMP1P01033 207 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 HPNP05981 417 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 ERCC1P07992 297 aaPredicted RBP2.99□□□□□ -1.93
CD44-223ENST00000526553 OR8G3PP0DMU2 310 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 CCNB1P14635 433 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 COX7A1P24310 79 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 CAV2P51636 162 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 CCNHP51946 323 aaPredicted RBP2.99□□□□□ -1.93
CD44-223ENST00000526553 GPX6P59796 221 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 MECOMQ03112 1051 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 ZNF763Q0D2J5 394 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 C22orf42Q6IC83 251 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 TMEM53Q6P2H8 277 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 ANGPTL8Q6UXH0 198 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 C19orf35Q6ZS72 473 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
CD44-223ENST00000526553 NIPA1Q7RTP0 329 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 SLC16A14Q7RTX9 510 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 C6orf223Q8N319 242 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 LIX1Q8N485 282 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 MS4A15Q8N5U1 240 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 ZNF557Q8N988 423 aaPredicted RBP2.99□□□□□ -1.93
CD44-223ENST00000526553 Q8N9L7 120 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 OR4A4PQ8NGN8 299 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 OR2G2Q8NGZ5 317 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 RHEBL1Q8TAI7 183 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 C8orf44Q96CB5 159 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 PANX1Q96RD7 426 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 NAT9Q9BTE0 207 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 DNTTIP1Q9H147 329 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 ANKRA2Q9H9E1 313 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 NANOGQ9H9S0 305 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 MMP17Q9ULZ9 603 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 FAM135BQ49AJ0 1406 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 NACAE9PAV3 2078 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 MSH6P52701 1360 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 TMEM94Q12767 1356 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 MTUS2Q5JR59 1369 aa2.99□□□□□ -1.93
CD44-223ENST00000526553 COL4A4P53420 1690 aaPredicted RBP2.98□□□□□ -1.93
CD44-223ENST00000526553 MYO5BQ9ULV0 1848 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 LRRC9Q6ZRR7 1453 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 SCAF11Q99590 1463 aaKnown RBP2.98□□□□□ -1.93
CD44-223ENST00000526553 SMCO2A6NFE2 343 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 DNAJB6O75190 326 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 FGFR1OPO95684 399 aaKnown RBP2.98□□□□□ -1.93
CD44-223ENST00000526553 IGKV3-11P04433 115 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 ALDOBP05062 364 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 GZMAP12544 262 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 HMOX2P30519 316 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 NSG1P42857 185 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 SLC1A1P43005 524 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 MAGEA1P43355 309 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 NAMPTP43490 491 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 NPBWR2P48146 333 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 CX3CR1P49238 355 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 SSR4P51571 173 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 TAS2R19P59542 299 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 TGFBR3Q03167 851 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 ALKBH6Q3KRA9 238 aa2.98□□□□□ -1.93
CD44-223ENST00000526553 CASC10Q5T4H9 136 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms