RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CSF3P09919 207 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 IFNGR1P15260 489 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 FASP25445 335 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 SLC9A3P48764 834 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 DAPP51397 102 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 CLDN17P56750 224 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 TSPAN31Q12999 210 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 GK3PQ14409 553 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 HIST3H3Q16695 136 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 ANKDD1AQ495B1 522 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF362Q5T0B9 420 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 TSPO2Q5TGU0 170 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 SHQ1Q6PI26 577 aaKnown RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 SLC35D2Q76EJ3 337 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 GALNT5Q7Z7M9 940 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 OAFQ86UD1 273 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 GPAT4Q86UL3 456 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 IGFN1Q86VF2 1251 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 AQP11Q8NBQ7 271 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 SEMA6DQ8NFY4 1073 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 OR10G2Q8NGC3 310 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 OR8D4Q8NGM9 314 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 FAM168AQ92567 244 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF837Q96EG3 531 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 NRBF2Q96F24 287 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 CENPNQ96H22 339 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 OR2M2Q96R28 347 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 GPX7Q96SL4 187 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 DDOQ99489 341 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 TACO1Q9BSH4 297 aaKnown RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 EMC6Q9BV81 110 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 MRPL13Q9BYD1 178 aaKnown RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 ACTR6Q9GZN1 396 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 C12orf49Q9H741 205 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 YY1AP1Q9H869 796 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 NRIP3Q9NQ35 241 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 SLC7A10Q9NS82 523 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 IL20Q9NYY1 176 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 PDP1Q9P0J1 537 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 TMEFF2Q9UIK5 374 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF346Q9UL40 294 aaKnown RBP9.52□□□□□ -0.89
NEDD8-204ENST00000526430 TMCC3Q9ULS5 477 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 TMEM5Q9Y2B1 443 aa9.52□□□□□ -0.89
NEDD8-204ENST00000526430 E9PQ18 207 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 GPR171O14626 319 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 IMPA2O14732 288 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 DEAF1O75398 565 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-204ENST00000526430 UPK3AO75631 287 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 PLGP00747 810 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-204ENST00000526430 IGHMP01871 453 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF43P17038 809 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 PSMB1P20618 241 aaKnown RBP9.51□□□□□ -0.89
NEDD8-204ENST00000526430 AHCYP23526 432 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 ACTG1P63261 375 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 DBPQ10586 325 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-204ENST00000526430 RFX4Q33E94 735 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 TMEM201Q5SNT2 666 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 ZFP1Q6P2D0 407 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 LRFN4Q6PJG9 635 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 RASSF6Q6ZTQ3 369 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 RRM2BQ7LG56 351 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 AAED1Q7RTV5 226 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 NANOGNBQ7Z5D8 188 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 LINC00471Q8N535 108 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 OR5K1Q8NHB7 308 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 ASB10Q8WXI3 467 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 HDAC2Q92769 488 aaKnown RBP9.51□□□□□ -0.89
NEDD8-204ENST00000526430 NEUROG1Q92886 237 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 MSI2Q96DH6 328 aaKnown RBP9.51□□□□□ -0.89
NEDD8-204ENST00000526430 OR52D1Q9H346 318 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 EGLN3Q9H6Z9 239 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 SMURF2Q9HAU4 748 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 NGBQ9NPG2 151 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 INIPQ9NRY2 104 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 IL20RAQ9UHF4 553 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 MGAT4BQ9UQ53 548 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 GPR52Q9Y2T5 361 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 NOSIPQ9Y314 301 aaKnown RBP9.51□□□□□ -0.89
NEDD8-204ENST00000526430 ADAM18Q9Y3Q7 739 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 NOX1Q9Y5S8 564 aa9.51□□□□□ -0.89
NEDD8-204ENST00000526430 NPIPB13A6NJU9 1138 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 FAM157AC9JC47 383 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 NPIPB4C9JG80 1138 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 GNGT2O14610 69 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 RNF13O43567 381 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 MITFO75030 526 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-204ENST00000526430 MRPL33O75394 65 aaKnown RBP9.5□□□□□ -0.89
NEDD8-204ENST00000526430 TXNDC12O95881 172 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 IGHV3-9P01782 118 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 HIST1H2ABP04908 130 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 SAGP10523 405 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-204ENST00000526430 IGHV1-2P23083 117 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 EPHA2P29317 976 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 ZNF133P52736 654 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-204ENST00000526430 CTXN1P60606 82 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 ERVK-25P63136 954 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 POU3F1Q03052 451 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-204ENST00000526430 MELKQ14680 651 aa9.5□□□□□ -0.89
NEDD8-204ENST00000526430 CR1LQ2VPA4 569 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms