RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 PTCHD4Q6ZW05 846 aa16.44■□□□□ 0.22
PTPRK-218ENST00000525459 OR52E2Q8NGJ4 325 aa16.44■□□□□ 0.22
PTPRK-218ENST00000525459 OR4K13Q8NH42 304 aa16.44■□□□□ 0.22
PTPRK-218ENST00000525459 PLEKHA8Q96JA3 519 aa16.44■□□□□ 0.22
PTPRK-218ENST00000525459 AMDHD2Q9Y303 409 aa16.44■□□□□ 0.22
PTPRK-218ENST00000525459 OR5H1A6NKK0 313 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 ZAR1LA6NP61 321 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 MITFO75030 526 aaPredicted RBP16.43■□□□□ 0.22
PTPRK-218ENST00000525459 FARS2O95363 451 aaKnown RBP16.43■□□□□ 0.22
PTPRK-218ENST00000525459 NPR2P20594 1047 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 GRNP28799 593 aaKnown RBP16.43■□□□□ 0.22
PTPRK-218ENST00000525459 CDKN2AP42771 156 aaKnown RBP16.43■□□□□ 0.22
PTPRK-218ENST00000525459 SLC35F1Q5T1Q4 408 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 OGFRL1Q5TC84 451 aaPredicted RBP16.43■□□□□ 0.22
PTPRK-218ENST00000525459 SLC25A47Q6Q0C1 308 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 DMRTC2Q8IXT2 367 aaPredicted RBP16.43■□□□□ 0.22
PTPRK-218ENST00000525459 SDR9C7Q8NEX9 313 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 HSD17B8Q92506 261 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 S100PBPQ96BU1 408 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 NMNAT3Q96T66 252 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 RACGAP1Q9H0H5 632 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 FKBP7Q9Y680 259 aa16.43■□□□□ 0.22
PTPRK-218ENST00000525459 USP9YO00507 2555 aaPredicted RBP16.43■□□□□ 0.22
PTPRK-218ENST00000525459 A1L4Q6 167 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 H7C1C5 153 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 PEX2P28328 305 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 LCN6P62502 163 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 MRPS34P82930 218 aaKnown RBP16.42■□□□□ 0.22
PTPRK-218ENST00000525459 ARF1P84077 181 aaKnown RBP16.42■□□□□ 0.22
PTPRK-218ENST00000525459 FMODQ06828 376 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 C9orf135Q5VTT2 229 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 SLX4IPQ5VYV7 408 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 DPPA2Q7Z7J5 298 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 IQCF1Q8N6M8 205 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 OR2T4Q8NH00 348 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 NANOS1Q8WY41 292 aaKnown RBP16.42■□□□□ 0.22
PTPRK-218ENST00000525459 MUCL1Q96DR8 90 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 DACH2Q96NX9 599 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 MED18Q9BUE0 208 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 VCX3BQ9H321 246 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 RIBC2Q9H4K1 309 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 TMEM38BQ9NVV0 291 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 SMPD3Q9NY59 655 aaPredicted RBP16.42■□□□□ 0.22
PTPRK-218ENST00000525459 ZNF226Q9NYT6 803 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 ARPC4-TTLL3A0A0A6YYG9 625 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 SH3D21A4FU49 640 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 SURF4O15260 269 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 KHDRBS3O75525 346 aaKnown RBP16.42■□□□□ 0.22
PTPRK-218ENST00000525459 GOSR1O95249 250 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 SLC2A10O95528 541 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 WNT11O96014 354 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 CENPAP49450 140 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 FOXG1P55316 489 aaPredicted RBP16.42■□□□□ 0.22
PTPRK-218ENST00000525459 TBRG1Q3YBR2 411 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 ZNF813Q6ZN06 617 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 FOXL2NBQ6ZUU3 175 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 NPEPL1Q8NDH3 523 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 SLC29A1Q99808 456 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 FN3KQ9H479 309 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 NGBQ9NPG2 151 aa16.42■□□□□ 0.22
PTPRK-218ENST00000525459 C19orf84I3L1E1 186 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 OR8G3PP0DMU2 310 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 KIR2DL3P43628 341 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 UBE2NP61088 152 aaKnown RBP16.41■□□□□ 0.22
PTPRK-218ENST00000525459 GLO1Q04760 184 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 ACSM5Q6NUN0 579 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 MEX3BQ6ZN04 569 aaKnown RBP16.41■□□□□ 0.22
PTPRK-218ENST00000525459 ZBTB46Q86UZ6 589 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 SLC37A3Q8NCC5 494 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 FAM222BQ8WU58 562 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 BCL2L2Q92843 193 aaPredicted RBP16.41■□□□□ 0.22
PTPRK-218ENST00000525459 ZNF837Q96EG3 531 aaPredicted RBP16.41■□□□□ 0.22
PTPRK-218ENST00000525459 NUAK2Q9H093 628 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 NELFAQ9H3P2 528 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 RPRD1BQ9NQG5 326 aaKnown RBP16.41■□□□□ 0.22
PTPRK-218ENST00000525459 SLC17A5Q9NRA2 495 aa16.41■□□□□ 0.22
PTPRK-218ENST00000525459 PLEKHB1Q9UF11 243 aaPredicted RBP16.41■□□□□ 0.22
PTPRK-218ENST00000525459 OR6C68A6NDL8 312 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 SLC16A7O60669 478 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 CTLA4P16410 223 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 BLVRAP53004 296 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 SLC25A1P53007 311 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 CDC42P60953 191 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 CRMP1Q14194 572 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 LRRC36Q1X8D7 754 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 ZNF362Q5T0B9 420 aaPredicted RBP16.4■□□□□ 0.22
PTPRK-218ENST00000525459 LPCAT4Q643R3 524 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 C12orf73Q69YU5 71 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 GLB1L2Q8IW92 636 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 SLC22A24Q8N4F4 322 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 HRASLS5Q96KN8 279 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 WACQ9BTA9 647 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 GRIP2Q9C0E4 1043 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 NKX1-2Q9UD57 310 aaPredicted RBP16.4■□□□□ 0.22
PTPRK-218ENST00000525459 KCNN3Q9UGI6 736 aa16.4■□□□□ 0.22
PTPRK-218ENST00000525459 ATP6V1G2O95670 118 aa16.39■□□□□ 0.21
PTPRK-218ENST00000525459 B4GALT1P15291 398 aa16.39■□□□□ 0.21
PTPRK-218ENST00000525459 PPA1Q15181 289 aa16.39■□□□□ 0.21
PTPRK-218ENST00000525459 TSC22D1Q15714 1073 aa16.39■□□□□ 0.21
PTPRK-218ENST00000525459 SNAPC1Q16533 368 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms