RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 A8MX80 341 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 NPIPB9F8W1W9 429 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 H3BSA7 217 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 APOC4-APOC2K7ER74 178 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PDLIM1O00151 329 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 GPR171O14626 319 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 HAT1O14929 419 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 P2RX6O15547 441 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CHST10O43529 356 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PSTPIP1O43586 416 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ZBTB14O43829 449 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 MGRN1O60291 552 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RAMP3O60896 148 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RDH16O75452 317 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 AQP8O94778 261 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 MYO1DO94832 1006 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 NXPH4O95158 308 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TGM6O95932 706 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 AGR2O95994 175 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 F10P00742 488 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 APOC2P02655 101 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 C8GP07360 202 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SLC35E2BP0CK96 405 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SLC35E2P0CK97 266 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SLC2A2P11168 524 aaPredicted RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 FERP16591 822 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PGCP20142 388 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OGNP20774 298 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 IL32P24001 234 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 IMPA1P29218 277 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 AGTR1P30556 359 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CCR7P32248 378 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RPA3P35244 121 aaPredicted RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 CASP2P42575 452 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SLCO1A2P46721 670 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR3A2P47893 321 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 HNMTP50135 292 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ATP4BP51164 291 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 NAGLUP54802 743 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 HADHBP55084 474 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 TPD52P55327 224 aaPredicted RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 XGP55808 180 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SH3BGRP55822 239 aaPredicted RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 RAG2P55895 527 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 RPS23P62266 143 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 NDPQ00604 133 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 REEP5Q00765 189 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 MYBPC1Q00872 1141 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OGDHQ02218 1023 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TGFBR3Q03167 851 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 EMX1Q04741 257 aaPredicted RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 BSPH1Q075Z2 132 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SLC3A1Q07837 685 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 WASHC5Q12768 1159 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PPA1Q15181 289 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CAMK4Q16566 473 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ZNF74Q16587 644 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CCSMST1Q4G0I0 132 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 EIPR1Q53HC9 387 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 AP1ARQ63HQ0 302 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 DUPD1Q68J44 220 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ACSM5Q6NUN0 579 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SCYL2Q6P3W7 929 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TRIM40Q6P9F5 258 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TEX38Q6PEX7 206 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 C4orf22Q6V702 233 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TFAP2EQ6VUC0 442 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 IL17RELQ6ZVW7 336 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 TMPRSS11FQ6ZWK6 438 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CHMP1BQ7LBR1 199 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SERPINA9Q86WD7 417 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 C17orf64Q86WR6 236 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PLCZ1Q86YW0 608 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 C9orf40Q8IXQ3 194 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CNPY4Q8N129 248 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 CA13Q8N1Q1 262 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 METTL4Q8N3J2 472 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 GTPBP8Q8N3Z3 284 aaPredicted RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 ZCCHC7Q8N3Z6 543 aaKnown RBP1.21□□□□□ -2.22
CD44-212ENST00000524922 KIF2BQ8N4N8 673 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 C11orf42Q8N5U0 333 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 PQLC3Q8N755 202 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ZNF525Q8N782 197 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ARIH2OSQ8N7S6 290 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 MLKLQ8NB16 471 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ZNF740Q8NDX6 193 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 KLHL30-AS1Q8NEE0 82 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 Q8NFD4 153 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR2L5Q8NG80 312 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR4F17Q8NGA8 305 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR4S1Q8NGB4 309 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR10G3Q8NGC4 313 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR4K2Q8NGD2 314 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR1J4Q8NGS1 313 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 OR9A4Q8NGU2 314 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 MUC7Q8TAX7 377 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 MRAPQ8TCY5 172 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 ZNF675Q8TD23 568 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 NPRL2Q8WTW4 380 aa1.21□□□□□ -2.22
CD44-212ENST00000524922 SSMEM1Q8WWF3 244 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms