RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 NPIPB13A6NJU9 1138 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 HMGB1P1B2RPK0 211 aaPredicted RBP10.14□□□□□ -0.79
SPARC-206ENST00000524277 NPIPB4C9JG80 1138 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 MCIDASD6RGH6 385 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 BLOC1S5-TXNDC5H3BN57 136 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 PPIHO43447 177 aaKnown RBP10.14□□□□□ -0.79
SPARC-206ENST00000524277 NPPAP01160 153 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 MT-ND1P03886 318 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 OPN1SWP03999 348 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 LCKP06239 509 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 GAAP10253 952 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 THRBP10828 461 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 APLNRP35414 380 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 ZNF133P52736 654 aaPredicted RBP10.14□□□□□ -0.79
SPARC-206ENST00000524277 MTPNP58546 118 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 TAF11Q15544 211 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 VMACQ2NL98 169 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 C10orf128Q5T292 105 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 MEX3DQ86XN8 651 aaKnown RBP10.14□□□□□ -0.79
SPARC-206ENST00000524277 WDFY1Q8IWB7 410 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 RBM15BQ8NDT2 890 aaKnown RBP10.14□□□□□ -0.79
SPARC-206ENST00000524277 OR4K5Q8NGD3 323 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 OR10A6Q8NH74 314 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 FNDC8Q8TC99 324 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 ZNF418Q8TF45 676 aaPredicted RBP10.14□□□□□ -0.79
SPARC-206ENST00000524277 LIPHQ8WWY8 451 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 MCHR2Q969V1 340 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 MAGEB18Q96M61 343 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 SEPHS2Q99611 448 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 SH3GL3Q99963 347 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 MRPL13Q9BYD1 178 aaKnown RBP10.14□□□□□ -0.79
SPARC-206ENST00000524277 SIAEQ9HAT2 523 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 SMURF2Q9HAU4 748 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 INIPQ9NRY2 104 aa10.14□□□□□ -0.79
SPARC-206ENST00000524277 OR5F1O95221 314 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 THY1P04216 161 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 PATE4P0C8F1 98 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 NAT2P11245 290 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 FUT1P19526 365 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 DRD4P21917 467 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 IFNA8P32881 189 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 LIPAP38571 399 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 CRYBB2P43320 205 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 UGT2B15P54855 530 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 LMO4P61968 165 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 MRPS34P82930 218 aaKnown RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 MELKQ14680 651 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 MAD2L1BPQ15013 274 aaPredicted RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 COQ5Q5HYK3 327 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 ACSM5Q6NUN0 579 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 ERICH5Q6P6B1 374 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 SHQ1Q6PI26 577 aaKnown RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 RINLQ6ZS11 566 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 USP43Q70EL4 1123 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 RETREG3Q86VR2 466 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 RBM45Q8IUH3 476 aaKnown RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 LRRC17Q8N6Y2 441 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 CPEB3Q8NE35 698 aaKnown RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 OR4D11Q8NGI4 311 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 VANGL1Q8TAA9 524 aaPredicted RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 FGFBP3Q8TAT2 258 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 YIPF5Q969M3 257 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 TAMM41Q96BW9 452 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 RAB39BQ96DA2 213 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 TIMD4Q96H15 378 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 NANOGQ9H9S0 305 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 CCNB1IP1Q9NPC3 277 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 MEPEQ9NQ76 525 aaPredicted RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 DECR2Q9NUI1 292 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 MYEF2Q9P2K5 600 aaKnown RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 EIF3KQ9UBQ5 218 aaKnown RBP10.13□□□□□ -0.79
SPARC-206ENST00000524277 FZR1Q9UM11 496 aa10.13□□□□□ -0.79
SPARC-206ENST00000524277 KPNA4O00629 521 aaPredicted RBP10.12□□□□□ -0.79
SPARC-206ENST00000524277 RP2O75695 350 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 OR7A10O76100 309 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 IGHV3-13P01766 116 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 MMP7P09237 267 aaPredicted RBP10.12□□□□□ -0.79
SPARC-206ENST00000524277 TSPAN19P0C672 248 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 FAM157BP0CG42 384 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 ACADSP16219 412 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 ITGA2P17301 1181 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 GUCA1AP43080 201 aaPredicted RBP10.12□□□□□ -0.79
SPARC-206ENST00000524277 GZMMP51124 257 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 TAS2R41P59536 307 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 HSF2Q03933 536 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 RPL18Q07020 188 aaKnown RBP10.12□□□□□ -0.79
SPARC-206ENST00000524277 SLC3A1Q07837 685 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 SELPLGQ14242 412 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 ZNF718Q3SXZ3 478 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 NANOGP8Q6NSW7 305 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 C12orf54Q6X4T0 127 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 CARM1Q86X55 608 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 NOXO1Q8NFA2 376 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 OR8J3Q8NGG0 315 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 TMEM239Q8WW34 195 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 ASB10Q8WXI3 467 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 RAB1CQ92928 201 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 SGTBQ96EQ0 304 aa10.12□□□□□ -0.79
SPARC-206ENST00000524277 LRRC37BQ96QE4 947 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms