RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SHISA9B4DS77 424 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 GNGT2O14610 69 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 ARPC3O15145 178 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 ARHGEF9O43307 516 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 IDH3BO43837 385 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 FKBP6O75344 327 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 SEC14L2O76054 403 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 CRYAAP02489 173 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 CD53P19397 219 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 CAPZA2P47755 286 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 IST1P53990 364 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 CDH11P55287 796 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 FXYD6P3P58550 94 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 MRPS34P82930 218 aaKnown RBP10.94□□□□□ -0.66
VEGFA-225ENST00000523950 KRR1Q13601 381 aaKnown RBP10.94□□□□□ -0.66
VEGFA-225ENST00000523950 C1orf146Q5VVC0 180 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 SLC22A25Q6T423 547 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 ZNF620Q6ZNG0 422 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 AQP11Q8NBQ7 271 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 OR9Q2Q8NGE9 314 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 OR52L1Q8NGH7 329 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 LILRB1Q8NHL6 650 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-225ENST00000523950 Q96M85 177 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 SNX18Q96RF0 628 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 CCL19Q99731 98 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 KCNS3Q9BQ31 491 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 C1QTNF6Q9BXI9 259 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 DGCR6LQ9BY27 220 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 DCLRE1BQ9H816 532 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 FAIMQ9NVQ4 179 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 B3GNT2Q9NY97 397 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 ADAM18Q9Y3Q7 739 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 CDH10Q9Y6N8 788 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 ABCA12Q86UK0 2595 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 DSCAMO60469 2012 aa10.94□□□□□ -0.66
VEGFA-225ENST00000523950 HEATR1Q9H583 2144 aaKnown RBP10.93□□□□□ -0.66
VEGFA-225ENST00000523950 TEX13CA0A0J9YWL9 993 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 SLC22A23A1A5C7 686 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 PRSS37A4D1T9 235 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 DEAF1O75398 565 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-225ENST00000523950 CIB2O75838 187 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 RAB36O95755 333 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 CECR9P0C854 216 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 CD79AP11912 226 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 GUCA1AP43080 201 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-225ENST00000523950 TUBA1BP68363 451 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 TUBA4AP68366 448 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 MYBPC1Q00872 1141 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 NAAAQ02083 359 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 COX10Q12887 443 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 DEFB113Q30KQ7 82 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 SLC36A2Q495M3 483 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 MESTQ5EB52 335 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 RASSF6Q6ZTQ3 369 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 FOXL2NBQ6ZUU3 175 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 TUBA1AQ71U36 451 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 MDP1Q86V88 176 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 OR10G2Q8NGC3 310 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 GIPC3Q8TF64 312 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 DUS3LQ96G46 650 aaKnown RBP10.93□□□□□ -0.66
VEGFA-225ENST00000523950 WACQ9BTA9 647 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 GRIP2Q9C0E4 1043 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 KCNN2Q9H2S1 579 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 C1orf198Q9H425 327 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 SIAEQ9HAT2 523 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 VNN3Q9NY84 501 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 IL20Q9NYY1 176 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 CISD1Q9NZ45 108 aaKnown RBP10.93□□□□□ -0.66
VEGFA-225ENST00000523950 ZNF224Q9NZL3 707 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 VSX1Q9NZR4 365 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-225ENST00000523950 DNAJB9Q9UBS3 223 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 POU2F3Q9UKI9 436 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 UGT2A1Q9Y4X1 527 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 IER3IP1Q9Y5U9 82 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 U3KQV3 271 aa10.93□□□□□ -0.66
VEGFA-225ENST00000523950 SLC2A10O95528 541 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 PPP1R3DO95685 299 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 PTHP01270 115 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 GASTP01350 101 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 HLA-HP01893 362 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 IDH3GP51553 393 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-225ENST00000523950 ARHGDIAP52565 204 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 RAB1AP62820 205 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 FMODQ06828 376 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 SPOCK1Q08629 439 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 FAM27BQ5VT28 67 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 ZNF544Q6NX49 715 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 TMEM53Q6P2H8 277 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 DNM1P34Q6PK57 102 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 CD300LDQ6UXZ3 194 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 SLC16A14Q7RTX9 510 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 SKA3Q8IX90 412 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 LRRC75A-AS1Q8N1F1 130 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 OR4F15Q8NGB8 312 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 SMAP2Q8WU79 429 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-225ENST00000523950 TMEM171Q8WVE6 324 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 IGFBPL1Q8WX77 278 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 SLCO4A1Q96BD0 722 aa10.92□□□□□ -0.66
VEGFA-225ENST00000523950 RASD2Q96D21 266 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms