RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SLC25A44Q96H78 314 aaPredicted RBP22.04■■□□□ 1.12
PVT1-219ENST00000523427 ZNF607Q96SK3 696 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 BCL2L14Q9BZR8 327 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 LRMDAQ9H2I8 198 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 TAS2R5Q9NYW4 299 aa22.04■■□□□ 1.12
PVT1-219ENST00000523427 CPSF4LA6NMK7 179 aaKnown RBP22.03■■□□□ 1.12
PVT1-219ENST00000523427 SERPINB7O75635 380 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 ZNF81P51508 661 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 TNFAIP8L3Q5GJ75 292 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 SPATA46Q5T0L3 261 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 WDR93Q6P2C0 686 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 RBMS3Q6XE24 437 aaKnown RBP22.03■■□□□ 1.12
PVT1-219ENST00000523427 RETREG3Q86VR2 466 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 TRIM44Q96DX7 344 aaPredicted RBP22.03■■□□□ 1.12
PVT1-219ENST00000523427 ZNF747Q9BV97 191 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 VAPAQ9P0L0 249 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 OPN4Q9UHM6 478 aa22.03■■□□□ 1.12
PVT1-219ENST00000523427 PTHP01270 115 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 UMPSP11172 480 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 APLNRP35414 380 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 CLRN1P58418 232 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 STX1BP61266 288 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 HSF2Q03933 536 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 HNRNPA0Q13151 305 aaKnown RBP22.02■■□□□ 1.12
PVT1-219ENST00000523427 MOGQ16653 247 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 SIGLECL1Q8N7X8 197 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 ELMOD3Q96FG2 381 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 C1orf198Q9H425 327 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 IKZF5Q9H5V7 419 aa22.02■■□□□ 1.12
PVT1-219ENST00000523427 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.02■■□□□ 1.12
PVT1-219ENST00000523427 HIST1H2ABP04908 130 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 FOXL1Q12952 345 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 ZNF74Q16587 644 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 PAGE3Q5JUK9 113 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 PRR31Q5SQ13 230 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 SHISA2Q6UWI4 295 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 HIST3H2AQ7L7L0 130 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 SYT14Q8NB59 555 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 HIST1H2ACQ93077 130 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 ZNF347Q96SE7 839 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 NTN4Q9HB63 628 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 TCF7L2Q9NQB0 619 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 NANSQ9NR45 359 aa22.01■■□□□ 1.11
PVT1-219ENST00000523427 SNAP29O95721 258 aa22■■□□□ 1.11
PVT1-219ENST00000523427 OPN1SWP03999 348 aa22■■□□□ 1.11
PVT1-219ENST00000523427 PGA4P0DJD7 388 aa22■■□□□ 1.11
PVT1-219ENST00000523427 PGA3P0DJD8 388 aa22■■□□□ 1.11
PVT1-219ENST00000523427 THEM4Q5T1C6 240 aa22■■□□□ 1.11
PVT1-219ENST00000523427 LRIF1Q5T3J3 769 aa22■■□□□ 1.11
PVT1-219ENST00000523427 SWT1Q5T5J6 900 aaKnown RBP22■■□□□ 1.11
PVT1-219ENST00000523427 TTC33Q6PID6 262 aaPredicted RBP22■■□□□ 1.11
PVT1-219ENST00000523427 BHLHE22Q8NFJ8 381 aaPredicted RBP22■■□□□ 1.11
PVT1-219ENST00000523427 VANGL1Q8TAA9 524 aaPredicted RBP22■■□□□ 1.11
PVT1-219ENST00000523427 ST7LQ8TDW4 575 aa22■■□□□ 1.11
PVT1-219ENST00000523427 MCHR2Q969V1 340 aa22■■□□□ 1.11
PVT1-219ENST00000523427 CCDC167Q9P0B6 97 aa22■■□□□ 1.11
PVT1-219ENST00000523427 CHP2O43745 196 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 MFN2O95140 757 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 IGHV1-46P01743 117 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 IGHV3-13P01766 116 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 IGHG1P01857 330 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 HKR1P10072 659 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 PPIBP23284 216 aaKnown RBP21.99■■□□□ 1.11
PVT1-219ENST00000523427 GCH1P30793 250 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 ZNF84P51523 738 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 PABPC1L2AQ5JQF8 200 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 ENTPD8Q5MY95 495 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 ZNF613Q6PF04 617 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 LINC00114Q6XXX2 140 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 FUNDC1Q8IVP5 155 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 CPEB3Q8NE35 698 aaKnown RBP21.99■■□□□ 1.11
PVT1-219ENST00000523427 SPDL1Q96EA4 605 aa21.99■■□□□ 1.11
PVT1-219ENST00000523427 DCLRE1CQ96SD1 692 aaKnown RBP21.99■■□□□ 1.11
PVT1-219ENST00000523427 PLSCR5A0PG75 271 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 EVPLLA8MZ36 301 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 BLOC1S5-TXNDC5H3BN57 136 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 GATA3P23771 443 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 RBMXP38159 391 aaKnown RBP21.98■■□□□ 1.11
PVT1-219ENST00000523427 MPV17P39210 176 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 DPPA2Q7Z7J5 298 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 RBM45Q8IUH3 476 aaKnown RBP21.98■■□□□ 1.11
PVT1-219ENST00000523427 HIPK4Q8NE63 616 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 OR6T1Q8NGN1 323 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 TMEM38AQ9H6F2 299 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 ANGPT4Q9Y264 503 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 USH1CQ9Y6N9 552 aa21.98■■□□□ 1.11
PVT1-219ENST00000523427 TGP01266 2768 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 MCIDASD6RGH6 385 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 ZFP36P26651 326 aaKnown RBP21.97■■□□□ 1.11
PVT1-219ENST00000523427 DEFA6Q01524 100 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 NPTX1Q15818 432 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 DUSP7Q16829 419 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 ZNF718Q3SXZ3 478 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 BLOC1S3Q6QNY0 202 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 NANOGNBQ7Z5D8 188 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 IPCEF1Q8WWN9 437 aaPredicted RBP21.97■■□□□ 1.11
PVT1-219ENST00000523427 GEMIN6Q8WXD5 167 aaKnown RBP21.97■■□□□ 1.11
PVT1-219ENST00000523427 DVL3Q92997 716 aaPredicted RBP21.97■■□□□ 1.11
PVT1-219ENST00000523427 ARHGDIGQ99819 225 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 PARD6BQ9BYG5 372 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms