RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 H7C417 338 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 IL32P24001 234 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 SELENBP1Q13228 472 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 CNN3Q15417 329 aaKnown RBP11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 AGAP7PQ5VUJ5 663 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 APOOLQ6UXV4 268 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 LRRC69Q6ZNQ3 347 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 BEND4Q6ZU67 534 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 PRR18Q8N4B5 295 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 SPACA9Q96E40 222 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 KTI12Q96EK9 354 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 OR51J1Q9H342 316 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 RDH8Q9NYR8 311 aa11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 CGGBP1Q9UFW8 167 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB1-201ENST00000523390 A0A087WUJ7 227 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 A0A0B4J2E0 115 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 A0A1B0GX12 115 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 NAP1L6A6NFF2 107 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 PATE3B3GLJ2 98 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 TEX46H3BTG2 121 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 GCH1P30793 250 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 VEGFCP49767 419 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 MTCP1P56278 107 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 XAF1Q6GPH4 301 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR4M1Q8NGD0 313 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 DPCDQ9BVM2 203 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 SLC22A11Q9NSA0 550 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 UBE2J1Q9Y385 318 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 NUBP2Q9Y5Y2 271 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 PRAMEF27A3QJZ7 478 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 CXCL13O43927 109 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 SLC22A5O76082 557 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 ABHD16AO95870 558 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 QDPRP09417 244 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 FCGR2AP12318 317 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 SRMP19623 302 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 GDNFP39905 211 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 GLYATL3Q5SZD4 288 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 PWWP2BQ6NUJ5 590 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 CBLN3Q6UW01 205 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 GLB1L2Q8IW92 636 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 SNIP1Q8TAD8 396 aaKnown RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 TSPAN10Q9H1Z9 355 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 C12orf49Q9H741 205 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 ISG20L2Q9H9L3 353 aaKnown RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 NDUFB11Q9NX14 153 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 DVL2O14641 736 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 TGM4P49221 684 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 FABP5Q01469 135 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 DUSP2Q05923 314 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 AGAP6Q5VW22 663 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 MAML2Q8IZL2 1156 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 DNAAF1Q8NEP3 725 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 AGAP4Q96P64 663 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 DCLRE1CQ96SD1 692 aaKnown RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 LIN7BQ9HAP6 207 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 SIGLEC7Q9Y286 467 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 HRH3Q9Y5N1 445 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 SCN5AQ14524 2016 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 IGHV3-15A0A0B4J1V0 119 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 HRKO00198 91 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF44P15621 663 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 ERP29P30040 261 aaKnown RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 CSRP3P50461 194 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZXDCQ2QGD7 858 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 UBE2NLQ5JXB2 153 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 RAB12Q6IQ22 244 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 METAP1DQ6UB28 335 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 LRRC20Q8TCA0 184 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 TTC9Q92623 222 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 MENTQ9BUN1 341 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 NIPAL2Q9H841 368 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 REV1Q9UBZ9 1251 aa11.89□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR7C1O76099 320 aaPredicted RBP11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 ATP1B3P54709 279 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF117Q03924 483 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 SLC36A2Q495M3 483 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 METTL11BQ5VVY1 283 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 C12orf73Q69YU5 71 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 MKXQ8IYA7 352 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 DYNC2LI1Q8TCX1 351 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 S1PR5Q9H228 398 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 DNAJB12Q9NXW2 375 aaKnown RBP11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 KCNG2Q9UJ96 466 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 MAB21L2Q9Y586 359 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 A0A0G2JMZ2 1700 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 SCN2AQ99250 2005 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 IGKV1-8A0A0C4DH67 115 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 RP2O75695 350 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 CPEP16870 476 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 HMGA2P52926 109 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 SEC61A1P61619 476 aaKnown RBP11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 SPEM2Q0P670 501 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 PLEKHN1Q494U1 663 aaPredicted RBP11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 LYPD4Q6UWN0 246 aa11.88□□□□□ -0.51
PCDHGB1-201ENST00000523390 SLC22A18ASQ8N1D0 253 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms