RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 LRTOMTQ8WZ04 291 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 TAAR8Q969N4 342 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 SAMD8Q96LT4 415 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 B9D2Q9BPU9 175 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 PCGF1Q9BSM1 259 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 C1orf50Q9BV19 199 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 LRMDAQ9H2I8 198 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 MTHFD2LQ9H903 347 aaPredicted RBP11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 A4GALTQ9NPC4 353 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 FBLN5Q9UBX5 448 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 EMCNQ9ULC0 261 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 DNAH1Q9P2D7 4330 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 A0A0U1RQK1 487 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 TMEM178BH3BS89 294 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 P2RY10O00398 339 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 NPHS1O60500 1241 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 C1QCP02747 245 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 CFHR2P36980 270 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 WNT5AP41221 380 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 CDK5R2Q13319 367 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 SMU1Q2TAY7 513 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 XKR7Q5GH72 579 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 ZMAT1Q5H9K5 638 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 FAM69AQ5T7M9 428 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 KANK2Q63ZY3 851 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 OR4F3Q6IEY1 312 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 SLC27A4Q6P1M0 643 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 WDR88Q6ZMY6 472 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 LRRC74BQ6ZQY2 392 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 OR4S1Q8NGB4 309 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 OR4A15Q8NGL6 344 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 SLC25A40Q8TBP6 338 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 NEIL1Q96FI4 390 aaPredicted RBP11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 PLEKHA8Q96JA3 519 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 TBX15Q96SF7 602 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 CDADC1Q9BWV3 514 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 SLC19A3Q9BZV2 496 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 TRIM15Q9C019 465 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 OR2J1Q9GZK6 312 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 RAB17Q9H0T7 212 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 DPAGT1Q9H3H5 408 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 RNF121Q9H920 327 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 ZDHHC18Q9NUE0 388 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 TMEM38BQ9NVV0 291 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 MIOXQ9UGB7 285 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 FOXJ3Q9UPW0 622 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 PPP1R3CQ9UQK1 317 aa11.5□□□□□ -0.57
NKX3-1-202ENST00000523261 IQCMA0A1B0GVH7 501 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 WI2-2373I1.2A0A1W2PRP0 233 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 ZNF726A6NNF4 738 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 OR2T1O43869 369 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 PEX11AO75192 247 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 ENTPD5O75356 428 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 CHEK2O96017 543 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 MMP9P14780 707 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 TNFRSF1AP19438 455 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 NCF2P19878 526 aaPredicted RBP11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 CBLP22681 906 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 TGFBR2P37173 567 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 CSNK1A1P48729 337 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 DNAJB13P59910 316 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 PGS1Q32NB8 556 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 IL23RQ5VWK5 629 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 ZNF836Q6ZNA1 936 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 DPPA2Q7Z7J5 298 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 VRK2Q86Y07 508 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 LYG1Q8N1E2 194 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 SPATA4Q8NEY3 305 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 C10orf82Q8WW14 230 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 PPP3R2Q96LZ3 170 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 KIF17Q9P2E2 1029 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 USH1CQ9Y6N9 552 aa11.49□□□□□ -0.57
NKX3-1-202ENST00000523261 A0A087WUJ7 227 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 IGHV1-69DA0A0B4J2H0 117 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 TMEM233B4DJY2 109 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 C22orf46C9J442 243 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 RNASET2O00584 256 aaKnown RBP11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 ZNF205O95201 554 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 FARS2O95363 451 aaKnown RBP11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 IGHV1-69P01742 117 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 CCNOP22674 350 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 GABRA5P31644 462 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 APLNRP35414 380 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 PITPNBP48739 271 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 EFNB2P52799 333 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 PLP2Q04941 152 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 UGT3A2Q3SY77 523 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 SLC36A2Q495M3 483 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 NET1Q7Z628 596 aaPredicted RBP11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 VPS37AQ8NEZ2 397 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 OR4K5Q8NGD3 323 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 TWIST2Q8WVJ9 160 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 ITLN1Q8WWA0 313 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 TMEM54Q969K7 222 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 SLC41A3Q96GZ6 507 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 TMEM246Q9BRR3 403 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 MMP28Q9H239 520 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 MARCOQ9UEW3 520 aaPredicted RBP11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 VPREB3Q9UKI3 123 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms