RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	KCNK17	Q96T54	332 aa		10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	BPESC1	Q9GZL8	116 aa		10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	MYLK2	Q9H1R3	596 aa		10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	TXNIP	Q9H3M7	391 aa		10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	EFCAB1	Q9HAE3	211 aa		10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	MYEF2	Q9P2K5	600 aa	Known RBP	10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	RHCG	Q9UBD6	479 aa		10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	SPEF1	Q9Y4P9	236 aa		10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	SVEP1	Q4LDE5	3571 aa		10.64	□□□□□ -0.71
VEGFA-223	ENST00000523125	HTR3E	A5X5Y0	456 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	MCIDAS	D6RGH6	385 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	ENTPD5	O75356	428 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	FARS2	O95363	451 aa	Known RBP	10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	SLC2A10	O95528	541 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	ZNF682	O95780	498 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	IFNW1	P05000	195 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	IFI30	P13284	250 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	CCL2	P13500	99 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	ZNF16	P17020	682 aa	Predicted RBP	10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	ZNF23	P17027	643 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	CDA	P32320	146 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	ZNF84	P51523	738 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	SEC24C	P53992	1094 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	MRPS34	P82930	218 aa	Known RBP	10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	GALK2	Q01415	458 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	PRKCD	Q05655	676 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	FMOD	Q06828	376 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	RIN1	Q13671	783 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	CHRFAM7A	Q494W8	412 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	ALG10	Q5BKT4	473 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	SLC25A47	Q6Q0C1	308 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	HDDC2	Q7Z4H3	204 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	DPPA2	Q7Z7J5	298 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	NRM	Q8IXM6	262 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	LRRC75A	Q8NAA5	344 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	SLC30A7	Q8NEW0	376 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	NABP1	Q96AH0	204 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	MSI2	Q96DH6	328 aa	Known RBP	10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	ELAC2	Q9BQ52	826 aa	Known RBP	10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	SYT3	Q9BQG1	590 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	SOX7	Q9BT81	388 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	FNDC11	Q9BVV2	318 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	TPK1	Q9H3S4	243 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	SMURF2	Q9HAU4	748 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	DYNLRB1	Q9NP97	96 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	TMEM160	Q9NX00	188 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	REV1	Q9UBZ9	1251 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	SLC7A8	Q9UHI5	535 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125	FZR1	Q9UM11	496 aa		10.63	□□□□□ -0.71
VEGFA-223	ENST00000523125		A0A087WUU8	490 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	LYNX1	G3V0Z9	82 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125		M0R233	179 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	MGRN1	O60291	552 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	LILRA1	O75019	489 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	SNAP29	O95721	258 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	SERPINA1	P01009	418 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	IGHM	P01871	453 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	TACSTD2	P09758	323 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	LYNX1	P0DP58	116 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	NCK1	P16333	377 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	ALDH3B1	P43353	468 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	GZMK	P49863	264 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	NUDT2	P50583	147 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	RPL27	P61353	136 aa	Known RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	RPS23	P62266	143 aa	Known RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	MAD2L1BP	Q15013	274 aa	Predicted RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	TRAM2	Q15035	370 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	SLC36A2	Q495M3	483 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	IFI44L	Q53G44	452 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	TMEM53	Q6P2H8	277 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	TBPL2	Q6SJ96	375 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	SLC16A14	Q7RTX9	510 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	IGFN1	Q86VF2	1251 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	LRRC18	Q8N456	261 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	CLDN22	Q8N7P3	220 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	ARIH2OS	Q8N7S6	290 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	ZNF540	Q8NDQ6	660 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	CPEB3	Q8NE35	698 aa	Known RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	UBASH3B	Q8TF42	649 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	GEMIN6	Q8WXD5	167 aa	Known RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	ACOT11	Q8WXI4	607 aa	Predicted RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	HSH2D	Q96JZ2	352 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	MS4A5	Q9H3V2	200 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	RNF121	Q9H920	327 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	SIAE	Q9HAT2	523 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	STX18	Q9P2W9	335 aa	Known RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	ABCD2	Q9UBJ2	740 aa		10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	ZNF346	Q9UL40	294 aa	Known RBP	10.62	□□□□□ -0.71
VEGFA-223	ENST00000523125	TRAV27	A0A087WT01	109 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	LRP5L	A4QPB2	252 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	CDC42EP2	O14613	210 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	GSTA4	O15217	222 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	ATP8B1	O43520	1251 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	LMX1B	O60663	402 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	HPX	P02790	462 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	ERCC1	P07992	297 aa	Predicted RBP	10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	FAM157B	P0CG42	384 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	FAM157C	P0CG43	387 aa		10.61	□□□□□ -0.71
VEGFA-223	ENST00000523125	SAG	P10523	405 aa	Predicted RBP	10.61	□□□□□ -0.71

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