RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SULT4A1Q9BR01 284 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 THTPAQ9BU02 230 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 ZDHHC6Q9H6R6 413 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SIX2Q9NPC8 291 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 NUFIP1Q9UHK0 495 aaKnown RBP6.85□□□□□ -1.31
HDAC3-216ENST00000523088 FBXL4Q9UKA2 621 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 RNF150Q9ULK6 438 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 HS3ST2Q9Y278 367 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 RBM7Q9Y580 266 aaKnown RBP6.85□□□□□ -1.31
HDAC3-216ENST00000523088 HS3ST3A1Q9Y663 406 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 CEP295Q9C0D2 2601 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 KNTC1P50748 2209 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 TRPM6Q9BX84 2022 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 KMT2BQ9UMN6 2715 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 FAM208BQ5VWN6 2430 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TRAV26-1A0A087WT03 109 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 A0A1W2PQC6 194 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TTC24A2A3L6 582 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 ZNF587BE7ETH6 402 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 F6UZH7 168 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 FAAHO00519 579 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 EREGO14944 169 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 PCDH7O60245 1069 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TSPAN15O95858 294 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TOMM40O96008 361 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 MT-CO2P00403 227 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 MT-ND4LP03901 98 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 GBAP04062 536 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 PRNPP04156 253 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RHOCP08134 193 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 OR8U9P0C7N5 309 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 OR56A5P0C7T3 313 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 ETFAP13804 333 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 NCK1P16333 377 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TFE3P19532 575 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 EFNA1P20827 205 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 PCMT1P22061 227 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RPS3P23396 243 aaKnown RBP eCLIP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 KDELR1P24390 212 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 MYL9P24844 172 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 VIPR1P32241 457 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 ID1P41134 155 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RAB28P51157 221 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 MFAP4P55083 255 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 SLC29A2Q14542 456 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RSU1Q15404 277 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RBMS2Q15434 407 aaKnown RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 NRF1Q16656 503 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TMEM241Q24JQ0 296 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 CEACAM21Q3KPI0 293 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 AKR1C8PQ5T2L2 129 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 FBXL22Q6P050 247 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 CASP12Q6UXS9 341 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 ASCL4Q6XD76 172 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 CDHR3Q6ZTQ4 885 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 OVCH1Q7RTY7 1134 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 CENPVQ7Z7K6 275 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 PTOV1Q86YD1 416 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 GTPBP8Q8N3Z3 284 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 MS4A15Q8N5U1 240 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 OR2AP1Q8NGE2 309 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 OR2T4Q8NH00 348 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 WFDC5Q8TCV5 224 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RXFP4Q8TDU9 374 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TMEM239Q8WW34 195 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 PTH2Q96A98 100 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 FAM131CQ96AQ9 280 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RPUSD4Q96CM3 377 aaKnown RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 MRPS24Q96EL2 167 aaKnown RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 PGAM5Q96HS1 289 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 FCRL1Q96LA6 429 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 MRGPRX3Q96LB0 322 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 PWWP2AQ96N64 755 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 AMDHD1Q96NU7 426 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 SPSB2Q99619 263 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 ATG101Q9BSB4 218 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 FEM1AQ9BSK4 669 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TMEM43Q9BTV4 400 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TKTL2Q9H0I9 626 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 EPB41L4BQ9H329 900 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TOR3AQ9H497 397 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 GSTO2Q9H4Y5 243 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 RNF121Q9H920 327 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 SYNPO2LQ9H987 977 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 ANKRA2Q9H9E1 313 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 WFDC1Q9HC57 220 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TRIM36Q9NQ86 728 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 TAS2R13Q9NYV9 303 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 HEY2Q9UBP5 337 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 VPS29Q9UBQ0 182 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 IL17BQ9UHF5 180 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 SLCO3A1Q9UIG8 710 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 NDRG4Q9ULP0 352 aaKnown RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 CARHSP1Q9Y2V2 147 aaKnown RBP6.84□□□□□ -1.31
HDAC3-216ENST00000523088 B3GALT1Q9Y5Z6 326 aa6.84□□□□□ -1.31
HDAC3-216ENST00000523088 PTPRBP23467 1997 aa6.84□□□□□ -1.32
HDAC3-216ENST00000523088 ACACAQ13085 2346 aa6.83□□□□□ -1.32
HDAC3-216ENST00000523088 GOLGA4Q13439 2230 aaKnown RBP6.83□□□□□ -1.32
HDAC3-216ENST00000523088 IGLV3-10A0A075B6K4 115 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms