RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CGREF1Q99674 301 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 PLA2G12AQ9BZM1 189 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 DENND2DQ9H6A0 471 aaPredicted RBP13.17□□□□□ -0.3
MRPS28-209ENST00000522987 ANGPT2O15123 496 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 FMO6PO60774 539 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 ERLIN1O75477 346 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 MPZL1O95297 269 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 SLC2A10O95528 541 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 ADRA2CP18825 462 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 ATP4BP51164 291 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 TMEM33P57088 247 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 SELENOVP59797 346 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 HSF2Q03933 536 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 FMODQ06828 376 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 RPL18Q07020 188 aaKnown RBP13.16□□□□□ -0.3
MRPS28-209ENST00000522987 ZP4Q12836 540 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 TBC1D28Q2M2D7 210 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 AGBL2Q5U5Z8 902 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 USP51Q70EK9 711 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 NKAIN4Q8IVV8 208 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 NOXO1Q8NFA2 376 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 OR1J1Q8NGS3 322 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 OR10A6Q8NH74 314 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 MOSPD2Q8NHP6 518 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 NSMAFQ92636 917 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 PRSS27Q9BQR3 290 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF416Q9BWM5 594 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF665Q9H7R5 613 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 MEPEQ9NQ76 525 aaPredicted RBP13.16□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF229Q9UJW7 825 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 FBXL3Q9UKT7 428 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 NDUFAF1Q9Y375 327 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
MRPS28-209ENST00000522987 IQCMA0A1B0GVH7 501 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 TRMUO75648 421 aaKnown RBP13.15□□□□□ -0.3
MRPS28-209ENST00000522987 IGHG1P01857 330 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 ASAH2BP0C7U1 165 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 FUT1P19526 365 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 MAKP20794 623 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 DRD4P21917 467 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 MPV17P39210 176 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 AQP2P41181 271 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF84P51523 738 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 UGT2B15P54855 530 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 PLP2Q04941 152 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
MRPS28-209ENST00000522987 SLC36A2Q495M3 483 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 TMEM255AQ5JRV8 349 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 AKR7LQ8NHP1 331 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 TMEM255BQ8WV15 326 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 C11orf40Q8WZ69 217 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF385DQ9H6B1 395 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 TRIM33Q9UPN9 1127 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 SH3GLB1Q9Y371 365 aa13.15□□□□□ -0.3
MRPS28-209ENST00000522987 IGLV3-9A0A075B6K5 115 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 IGKV1D-43A0A0B4J1Z2 117 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 IGHV1-69-2A0A0G2JMI3 117 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 A0A1W2PRG6 482 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 SPRY3O43610 288 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 PLPP2O43688 288 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 PIP5K1CO60331 668 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 PNPP00491 289 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 ZNF250P15622 560 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 EPHA1P21709 976 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 PCGF2P35227 344 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 APLNRP35414 380 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 RAD52P43351 418 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 CRYBA2P53672 197 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 UCP2P55851 309 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 TOP3AQ13472 1001 aaPredicted RBP13.14□□□□□ -0.31
MRPS28-209ENST00000522987 SGCAQ16586 387 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 PABPC1L2AQ5JQF8 200 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 PATL1Q86TB9 770 aaKnown RBP13.14□□□□□ -0.31
MRPS28-209ENST00000522987 CPEB3Q8NE35 698 aaKnown RBP13.14□□□□□ -0.31
MRPS28-209ENST00000522987 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 ZNF418Q8TF45 676 aaPredicted RBP13.14□□□□□ -0.31
MRPS28-209ENST00000522987 ASB10Q8WXI3 467 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 C22orf15Q8WYQ4 148 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
MRPS28-209ENST00000522987 EVA1AQ9H8M9 152 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 C20orf141Q9NUB4 165 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 DECR2Q9NUI1 292 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 GPR160Q9UJ42 338 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 WIPI2Q9Y4P8 454 aa13.14□□□□□ -0.31
MRPS28-209ENST00000522987 TRAV20A0A0B4J274 112 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 SLC22A23A1A5C7 686 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 ISPDA4D126 451 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 OR7A10O76100 309 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 MMP7P09237 267 aaPredicted RBP13.13□□□□□ -0.31
MRPS28-209ENST00000522987 ACADSP16219 412 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 ZNF32P17041 273 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 OR1E2P47887 323 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 TAS2R41P59536 307 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 ERVK-25P63136 954 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 CD47Q08722 323 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 LAPTM4AQ15012 233 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 SPRNQ5BIV9 151 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 RABL3Q5HYI8 236 aa13.13□□□□□ -0.31
MRPS28-209ENST00000522987 THEM4Q5T1C6 240 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms