RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 C10orf67Q8IYJ2 551 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 KIR3DL3Q8N743 410 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 ZBTB34Q8NCN2 500 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 GPR119Q8TDV5 335 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 TMIGD2Q96BF3 282 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 SPDL1Q96EA4 605 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 ELP4Q96EB1 424 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 BOD1Q96IK1 185 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 SLC38A2Q96QD8 506 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 OR5B2Q96R09 309 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 KATNB1Q9BVA0 655 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 DPY30Q9C005 99 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 GLIPR2Q9H4G4 154 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 ZNF442Q9H7R0 627 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 ZNF665Q9H7R5 613 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 ZNF275Q9NSD4 429 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-210ENST00000522843 CRNNQ9UBG3 495 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-210ENST00000522843 ABCD2Q9UBJ2 740 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-210ENST00000522843 GIMAP2Q9UG22 337 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 ATP6V1HQ9UI12 483 aa5.63□□□□□ -1.51
SDCBP-210ENST00000522843 LEF1Q9UJU2 399 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-210ENST00000522843 MRTO4Q9UKD2 239 aaKnown RBP5.63□□□□□ -1.51
SDCBP-210ENST00000522843 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 TRBV5-3A0A0A0MS03 114 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 A0A0G2JMP0 313 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 A0A0X1KG70 313 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 PRSS51A0A1B0GVH4 220 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 A0A1W2PQD3 144 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 CCDC154A6NI56 674 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 ANKRD65E5RJM6 399 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 CLDN34H7C241 214 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 J3QLI3 93 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 NR5A2O00482 541 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 AIM2O14862 343 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 KCNK2O95069 426 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 IGLV1-44P01699 117 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 ZCCHC18P0CG32 403 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 HSD17B1P14061 328 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 HOXB9P17482 250 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 SDC1P18827 310 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 NPR2P20594 1047 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 SLC7A1P30825 629 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 TIA1P31483 386 aaKnown RBP eCLIP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 MPIP34949 423 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 ARL1P40616 181 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 SLC1A3P43003 542 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 DIO1P49895 249 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 NCBP2P52298 156 aaKnown RBP eCLIP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 PRPS1P60891 318 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 ACTR3P61158 418 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 PSME3P61289 254 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 RPL38P63173 70 aaKnown RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 MYBPC1Q00872 1141 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 BAMBIQ13145 260 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 TRMT5Q32P41 509 aaKnown RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 VPS26BQ4G0F5 336 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 VAX1Q5SQQ9 334 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 CCNJQ5T5M9 372 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 REP15Q6BDI9 236 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 FAM71E1Q6IPT2 247 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 ACSM5Q6NUN0 579 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 ANKRD16Q6P6B7 361 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 TMPPEQ6ZT21 453 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 R3HCC1LQ7Z5L2 792 aaKnown RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 SLC15A3Q8IY34 581 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 DEFB107AQ8IZN7 70 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 TEX29Q8N6K0 151 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 NUP37Q8NFH4 326 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 OR4M2Q8NGB6 313 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 OR9I1Q8NGQ6 314 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 FBXO30Q8TB52 745 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 C16orf78Q8WTQ4 265 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 GTF2H4Q92759 462 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 RCN3Q96D15 328 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 DNAJA3Q96EY1 480 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 GIMAP5Q96F15 307 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 OTUB1Q96FW1 271 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 DUS3LQ96G46 650 aaKnown RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 AMDHD1Q96NU7 426 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 CDRT15Q96T59 188 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 ZBTB18Q99592 522 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 PRPF18Q99633 342 aaKnown RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 SH3GL1Q99961 368 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 THTPAQ9BU02 230 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 ZMAT3Q9HA38 289 aaKnown RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 EQTNQ9NQ60 294 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 TMEM140Q9NV12 185 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 DDX18Q9NVP1 670 aaKnown RBP5.62□□□□□ -1.51
SDCBP-210ENST00000522843 FAM30AQ9NZY2 134 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 SLC7A8Q9UHI5 535 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 BTNL2Q9UIR0 455 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 CARD8Q9Y2G2 431 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 HERC2O95714 4834 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 NOTCH3Q9UM47 2321 aa5.62□□□□□ -1.51
SDCBP-210ENST00000522843 A0A096LPI6 279 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 M0QZ24 198 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 FXYD1O00168 92 aa5.61□□□□□ -1.51
SDCBP-210ENST00000522843 ACOT8O14734 319 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms