RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 WRBO00258 174 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 NDUFAB1O14561 156 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 EEDO75530 441 aaKnown RBP3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 FGGP02679 453 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 CRISP2P16562 243 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 ZNF17P17021 662 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 DCKP27707 260 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 FOXN2P32314 431 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 UGT2B15P54855 530 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 PAX5Q02548 391 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 LIPEQ05469 1076 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 MERTKQ12866 999 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 PGGHGQ32M88 737 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 KRTAP13-3Q3SY46 172 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 C9orf135Q5VTT2 229 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 C22orf42Q6IC83 251 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 LYPD2Q6UXB3 125 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 KRTAP11-1Q8IUC1 163 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 LINC01555Q8NAE3 123 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 OR4A4PQ8NGN8 299 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 FAM151AQ8WW52 585 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 STARD8Q92502 1023 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 C8orf44Q96CB5 159 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 SLC29A1Q99808 456 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 SIAEQ9HAT2 523 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 PSME2Q9UL46 239 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 TBC1D24Q9ULP9 559 aa3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 PACSIN2Q9UNF0 486 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 PRG3Q9Y2Y8 225 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 LRP4O75096 1905 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 ATP10BO94823 1461 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 DISP1Q96F81 1524 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 KCNE1BA0A087WTH5 132 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 TRAV39A0A0B4J263 110 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 PEX7O00628 323 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 AQP8O94778 261 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 IGLV2-23P01705 113 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 ALDOBP05062 364 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 GKN3PP0CG01 181 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 RCC1P18754 421 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 CRISP3P54108 245 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 CLDN8P56748 225 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 PRPS1P60891 318 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 SLC25A11Q02978 314 aaKnown RBP3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 REG3AQ06141 175 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 ORC2Q13416 577 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 REEP3Q6NUK4 255 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 TMEM53Q6P2H8 277 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 SLC34A3Q8N130 599 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 GABRG1Q8N1C3 465 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 STPG2Q8N412 459 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 COMMD1Q8N668 190 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 OR4F15Q8NGB8 312 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 OR2G2Q8NGZ5 317 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 MARCH1Q8TCQ1 289 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 NDRG1Q92597 394 aaKnown RBP3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 SGK3Q96BR1 496 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 OR2M2Q96R28 347 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 PLGRKTQ9HBL7 147 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 GNPTGQ9UJJ9 305 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 PCF11O94913 1555 aaKnown RBP3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 MSH6P52701 1360 aa3.11□□□□□ -1.91
HMGB1P1-201ENST00000522557 PTPRTO14522 1441 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 NEO1Q92859 1461 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 DENND4AQ7Z401 1863 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 IQGAP2Q13576 1575 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 SMCO3A2RU48 225 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 NCF1BA6NI72 391 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 NCF1CA8MVU1 366 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 L7N2F9 121 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 CASQ2O14958 399 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 EIF4E2O60573 245 aaKnown RBP3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 DNAJB6O75190 326 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 UTS2O95399 124 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 OXTP01178 125 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 ERCC1P07992 297 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 ANXA5P08758 320 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 RRM2P31350 389 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 RBMXP38159 391 aaKnown RBP3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 CCR8P51685 355 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 RGS8P57771 180 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 IRF8Q02556 426 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 ARFRP1Q13795 201 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 IL18Q14116 193 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 LRRC10Q5BKY1 277 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 C6orf89Q6UWU4 347 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 SLC16A14Q7RTX9 510 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 THOC6Q86W42 341 aaKnown RBP3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 KATNAL2Q8IYT4 538 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 OR1N2Q8NGR9 330 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 OR2G3Q8NGZ4 309 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 GLYATL2Q8WU03 294 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 PEX13Q92968 403 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 STMN2Q93045 179 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 WFIKKN1Q96NZ8 548 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 SH3GL3Q99963 347 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 ANKRD60Q9BZ19 345 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 ROGDIQ9GZN7 287 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 DNTTIP1Q9H147 329 aa3.1□□□□□ -1.91
HMGB1P1-201ENST00000522557 LYARQ9NX58 379 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms