RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RAB14P61106 215 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 TSPAN31Q12999 210 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 NECTIN1Q15223 517 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 CCDC6Q16204 474 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 PSMD5Q16401 504 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 HLFQ16534 295 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 CYP51A1Q16850 503 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 TMEM249Q2WGJ8 235 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ACER2Q5QJU3 275 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 RBM48Q5RL73 367 aaKnown RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 GPRC6AQ5T6X5 926 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 SDHAF4Q5VUM1 108 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 BSPRYQ5W0U4 402 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ZNF57Q68EA5 555 aaPredicted RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 OR5M10Q6IEU7 315 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 TRIM40Q6P9F5 258 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 Q6ZSR9 355 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 USP43Q70EL4 1123 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 CCDC71Q8IV32 467 aaPredicted RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 LSMEM2Q8N112 164 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 CCDC112Q8NEF3 446 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 PRSS33Q8NF86 280 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 OR4K2Q8NGD2 314 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 OR51A7Q8NH64 312 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 DYRK2Q92630 601 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 CMTM7Q96FZ5 175 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ADGRG7Q96K78 797 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 MBOAT7Q96N66 472 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 PRSS22Q9GZN4 317 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 RBM38Q9H0Z9 239 aaKnown RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 GAREM1Q9H706 876 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 TMBIM4Q9HC24 238 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 IL1RAPQ9NPH3 570 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 MED4Q9NPJ6 270 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 RHBDL2Q9NX52 303 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 VAPAQ9P0L0 249 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ABCB11O95342 1321 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ANKRD20A5PA0PJZ0 165 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 HACD1B0YJ81 288 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 TMEM114B3SHH9 223 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 NPIPB9F8W1W9 429 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 H7C0C1 242 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 SULT2B1O00204 365 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 MRPS12O15235 138 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 PRKNO60260 465 aaPredicted RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 UGT1A9O60656 530 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 UTS2O95399 124 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 RAB3DO95716 219 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 IFNA5P01569 189 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 GIMD1P0DJR0 217 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CXCR2P25025 360 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CERS1P27544 350 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 GTF2H1P32780 548 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 KIR3DL2P43630 455 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CAPZBP47756 277 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 HOXA1P49639 335 aaPredicted RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 NKX2-5P52952 324 aaPredicted RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 PLK1P53350 603 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 KRTAP10-2P60368 255 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CXCR4P61073 352 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 STXBP1P61764 594 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 RPL31P62899 125 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 PAFAH1B2P68402 229 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 SLC10A2Q12908 348 aaPredicted RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 DYNC1I2Q13409 638 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 CAPRIN1Q14444 709 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 HHATQ5VTY9 493 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 SLC18B1Q6NT16 456 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 GDPD4Q6W3E5 623 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 ZFAND4Q86XD8 727 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 HIPK1Q86Z02 1210 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 HS3ST5Q8IZT8 346 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 VKORC1L1Q8N0U8 176 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 WDR31Q8NA23 367 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 DUSP18Q8NEJ0 188 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 OR2T6Q8NHC8 308 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 RFESDQ8TAC1 157 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CXorf40AQ8TE69 158 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 RASL10AQ92737 203 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CMTM5Q96DZ9 223 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 WBP1Q96G27 269 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 TMEM80Q96HE8 168 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 MS4A14Q96JA4 679 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 IL17FQ96PD4 163 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 TAAR1Q96RJ0 339 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 MRPL45Q9BRJ2 306 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 CCDC28BQ9BUN5 200 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 ING2Q9H160 280 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 IL25Q9H293 177 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 LIME1Q9H400 295 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 IFT46Q9NQC8 304 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 B3GNT2Q9NY97 397 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 SLC2A6Q9UGQ3 507 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 MUTYHQ9UIF7 546 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 GNPTGQ9UJJ9 305 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 RAB23Q9ULC3 237 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CLEC4EQ9ULY5 219 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 A0A1B0GU03 582 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 MSGN1A6NI15 193 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CYTH3O43739 400 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms